WormBase Tree Display for Gene: WBGene00007488
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| WBGene00007488 | SMap | S_parent | Sequence | C09G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dph-2 | Person_evidence | WBPerson1847 | |||||
| Sequence_name | C09G5.2 | ||||||||
| Molecular_name | C09G5.2a | ||||||||
| C09G5.2a.1 | |||||||||
| CE15608 | |||||||||
| C09G5.2b | |||||||||
| CE45960 | |||||||||
| C09G5.2b.1 | |||||||||
| Other_name | CELE_C09G5.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dph-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Jan 2009 14:04:49 | WBPerson2970 | Name_change | CGC_name | dph-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dph | ||||||||
| Allele (181) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00007576 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dph-2 encodes an ortholog of S. cerevisiae DPH2/YKL191W and human DPH2L2 (OMIM:603456); DPH-2 is a putative protein component of diphtamide synthesis. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00012895 | |||||||||
| WBPaper00013419 | |||||||||
| WBPaper00013534 | |||||||||
| WBPaper00013537 | |||||||||
| WBPaper00013539 | |||||||||
| WBPaper00013556 | |||||||||
| WBPaper00013562 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 14 Dec 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable 4 iron, 4 sulfur cluster binding activity. Predicted to contribute to 2-(3-amino-3-carboxypropyl)histidine synthase activity. Predicted to be involved in protein histidyl modification to diphthamide. Predicted to be located in protein-containing complex. Is an ortholog of human DPH2 (diphthamide biosynthesis 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070478 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3004) | ||||
| Molecular_info | Corresponding_CDS | C09G5.2a | |||||||
| C09G5.2b | |||||||||
| Corresponding_transcript | C09G5.2a.1 | ||||||||
| C09G5.2b.1 | |||||||||
| Other_sequence | Acan_isotig11903 | ||||||||
| JI174376.1 | |||||||||
| CBC11879_1 | |||||||||
| Oden_isotig23517 | |||||||||
| Tcir_isotig13161 | |||||||||
| FK807855.1 | |||||||||
| Oden_isotig24927 | |||||||||
| Associated_feature | WBsf989448 | ||||||||
| WBsf989449 | |||||||||
| WBsf1013074 | |||||||||
| WBsf223828 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028737 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040232 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075412 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072831 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072830 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012769 | ||||||||
| Expr1033219 | |||||||||
| Expr1144306 | |||||||||
| Expr2011048 | |||||||||
| Expr2029285 | |||||||||
| Drives_construct | WBCnstr00033701 | ||||||||
| Construct_product | WBCnstr00033701 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | II | Position | 3.12407 | Error | 3.7e-05 | |||
| Positive | Positive_clone | C09G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062217 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
