WormBase Tree Display for Gene: WBGene00006610
expand all nodes | collapse all nodes | view schema
| WBGene00006610 | SMap | S_parent | Sequence | F15A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tre-4 | |||||||
| Sequence_name | F15A2.2 | ||||||||
| Molecular_name | F15A2.2 | ||||||||
| F15A2.2.1 | |||||||||
| CE35484 | |||||||||
| Other_name | CELE_F15A2.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tre-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tre | ||||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00014418 | ||||||||
| 00014419 | |||||||||
| 00014420 | |||||||||
| 00014421 | |||||||||
| 00014422 | |||||||||
| 00014423 | |||||||||
| 00014424 | |||||||||
| 00114460 | |||||||||
| 00114461 | |||||||||
| 00114462 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00006607 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006608 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006609 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006611 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable alpha,alpha-trehalase activity. Predicted to be involved in trehalose catabolic process. Predicted to be located in membrane. Expressed in neurons and tail. Is an ortholog of human TREH (trehalase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F15A2.2 | |||||||
| Corresponding_CDS_history | F15A2.2:wp109 | ||||||||
| Corresponding_transcript | F15A2.2.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf648671 | ||||||||
| WBsf1007616 | |||||||||
| WBsf1007617 | |||||||||
| WBsf1007618 | |||||||||
| WBsf1024234 | |||||||||
| WBsf1024235 | |||||||||
| WBsf1024236 | |||||||||
| WBsf236570 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044667 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013334 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030978 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5762 | ||||||||
| Expr10726 | |||||||||
| Expr1025486 | |||||||||
| Expr1148641 | |||||||||
| Expr2017491 | |||||||||
| Expr2035630 | |||||||||
| Drives_construct | WBCnstr00003932 | ||||||||
| WBCnstr00034270 | |||||||||
| Construct_product | WBCnstr00034270 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | 12.5969 | Error | 0.008415 | |||
| Positive | Positive_clone | F15A2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006140 | ||||||||
| WBPaper00017649 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064229 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
