WormBase Tree Display for Gene: WBGene00006467
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WBGene00006467 | SMap | S_parent | Sequence | C01B7 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | magu | |||||
Allele (111) | ||||||
Strain | WBStrain00001351 | |||||
WBStrain00031792 | ||||||
WBStrain00035753 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (15) | ||||||
Ortholog (38) | ||||||
Paralog | WBGene00002991 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00016841 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00021914 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
Structured_description | Concise_description | magu-2 encodes a protein with similarity to the MAGUK (membrane-associated guanylate kinase) family of proteins; loss of magu-2 activity in large-scale RNAi screens can result in embryonic lethality with low, reproducible chromosome segregation defects; magu-2 exhibits genetic interactions with sem-5 and glp-1. | Paper_evidence | WBPaper00025054 | ||
WBPaper00031036 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 06 Jan 2011 00:00:00 | |||||
Automated_description | Predicted to be involved in several processes, including establishment or maintenance of cell polarity; morphogenesis of an epithelial sheet; and protein localization to plasma membrane. Predicted to be located in adherens junction and plasma membrane. Expressed in head; hypodermis; and pharyngeal muscle cell. Is an ortholog of human PALS1 (protein associated with LIN7 1, MAGUK p55 family member). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C01B7.4a | ||||
C01B7.4b | ||||||
Corresponding_CDS_history | C01B7.4:wp267 | |||||
Corresponding_transcript | C01B7.4a.1 | |||||
C01B7.4b.1 | ||||||
Other_sequence (25) | ||||||
Associated_feature | WBsf652873 | |||||
WBsf717246 | ||||||
WBsf718362 | ||||||
WBsf718363 | ||||||
WBsf1000758 | ||||||
WBsf1000759 | ||||||
WBsf1000760 | ||||||
WBsf1000761 | ||||||
WBsf1020096 | ||||||
WBsf1020097 | ||||||
Experimental_info (8) | ||||||
Map_info (4) | ||||||
Reference | WBPaper00031333 | |||||
WBPaper00035956 | ||||||
WBPaper00038491 | ||||||
WBPaper00051918 | ||||||
WBPaper00055090 | ||||||
WBPaper00058545 | ||||||
WBPaper00059621 | ||||||
WBPaper00062554 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Moved tag-117 from magu-1 to magu-2 where it belongs, seems like a very old (2013) misassignment. | ||||||
Method | Gene |