WormBase Tree Display for Gene: WBGene00005652
expand all nodes | collapse all nodes | view schema
| WBGene00005652 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srr-1 | Person_evidence | WBPerson522 | |||||
| Sequence_name | W07G4.6 | ||||||||
| Molecular_name | W07G4.6a | ||||||||
| W07G4.6a.1 | |||||||||
| CE30338 | |||||||||
| W07G4.6b | |||||||||
| CE50241 | |||||||||
| W07G4.6b.1 | |||||||||
| Other_name | CELE_W07G4.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srr-1 | ||||||||
| DB_info | Database | AceView | gene | 5N530 | |||||
| WormQTL | gene | WBGene00005652 | |||||||
| WormFlux | gene | WBGene00005652 | |||||||
| NDB | locus_tag | CELE_W07G4.6 | |||||||
| Panther | gene | CAEEL|WormBase=W07G4.6b|UniProtKB=A0A0K3AXG8 | |||||||
| family | PTHR31930 | ||||||||
| NCBI | gene | 189285 | |||||||
| RefSeq | protein | NM_001313070.5 | |||||||
| NM_001377607.2 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AXG8 | |||||||
| G5EG25 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AXG8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srr | ||||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001604 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00005654 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005655 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005656 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00005657 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005659 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005660 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005658 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00005653 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in neuronal sheath cell; pharynx; and ray. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W07G4.6a | |||||||
| W07G4.6b | |||||||||
| Corresponding_CDS_history | W07G4.6:wp73 | ||||||||
| Corresponding_transcript | W07G4.6a.1 | ||||||||
| W07G4.6b.1 | |||||||||
| Other_sequence | CRC08060_1 | ||||||||
| CR03530 | |||||||||
| Associated_feature | WBsf669544 | ||||||||
| WBsf1001703 | |||||||||
| WBsf1001704 | |||||||||
| WBsf1001705 | |||||||||
| WBsf1001706 | |||||||||
| WBsf1020647 | |||||||||
| WBsf1020648 | |||||||||
| WBsf1020649 | |||||||||
| WBsf234766 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019709 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054966 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14124 | ||||||||
| Expr1019957 | |||||||||
| Expr1158499 | |||||||||
| Expr2016611 | |||||||||
| Expr2034802 | |||||||||
| Drives_construct | WBCnstr00034819 | ||||||||
| Construct_product | WBCnstr00034819 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000334734 | ||||||||
| Map_info | Map | V | Position | 4.85491 | Error | 0.009191 | |||
| Positive | Positive_clone | W07G4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
