WormBase Tree Display for Gene: WBGene00004191
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WBGene00004191 | SMap | S_parent | Sequence | C11H1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | prx-1 | |||||||
Sequence_name | C11H1.4 | ||||||||
Molecular_name (6) | |||||||||
Other_name | pex-1 | Paper_evidence | WBPaper00004835 | ||||||
WBPaper00018161 | |||||||||
WBPaper00005418 | |||||||||
WBPaper00005877 | |||||||||
pex1 | Accession_evidence | EMBL | AB054992 | ||||||
C11H1.6 | Paper_evidence | WBPaper00005418 | |||||||
CELE_C11H1.4 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | prx-1 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00004191 | |||||
WormFlux | gene | WBGene00004191 | |||||||
NDB | locus_tag | CELE_C11H1.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004191|UniProtKB=G5ED99 | |||||||
family | PTHR23077 | ||||||||
NCBI | gene | 181538 | |||||||
RefSeq | protein | NM_001381145.1 | |||||||
NM_077985.7 | |||||||||
TREEFAM | TREEFAM_ID | TF106447 | |||||||
TrEMBL | UniProtAcc | G5ED99 | |||||||
A6ZJ67 | |||||||||
UniProt_GCRP | UniProtAcc | G5ED99 | |||||||
OMIM | gene | 602136 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | prx | ||||||||
Allele (302) | |||||||||
Strain | WBStrain00035803 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005027 | ||||||||
00005028 | |||||||||
00005029 | |||||||||
00005030 | |||||||||
00005031 | |||||||||
00005032 | |||||||||
00112456 | |||||||||
00112457 | |||||||||
00112458 | |||||||||
00112459 | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00003119 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00007352 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00008053 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00004195 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00010562 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00013156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0080623 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8850) | ||||
DOID:0080476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8850) | ||||||
DOID:0081240 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8850) | ||||||
Molecular_info | Corresponding_CDS | C11H1.4a | |||||||
C11H1.4b | |||||||||
Corresponding_CDS_history | C11H1.4:wp74 | ||||||||
Corresponding_transcript | C11H1.4a.1 | ||||||||
C11H1.4b.1 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00028813 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062860 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040366 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024539 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040365 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024538 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010633 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027170 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010631 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007234 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1637 | ||||||||
Expr1022255 | |||||||||
Expr1032051 | |||||||||
Expr1144429 | |||||||||
Expr2015124 | |||||||||
Expr2033362 | |||||||||
Microarray_results (25) | |||||||||
Expression_cluster (82) | |||||||||
Interaction (72) | |||||||||
Map_info | Map | X | Position | 16.6804 | Error | 0.001645 | |||
Positive | Positive_clone | C11H1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4254 | |||||||
4606 | |||||||||
5538 | |||||||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Sequence connection from [Motley AM, Plasterk RHA], 02/06/13 krb. | ||||||||
The connected sequence (C11H1.4) was previously C11H1.6 (the C11H1.4 gene was extended and incorporated C11H1.6). krb | |||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |