WormBase Tree Display for Gene: WBGene00003924
expand all nodes | collapse all nodes | view schema
WBGene00003924 | Evidence | CGC_data_submission | ||||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y110A7A | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pas | |||||
Allele | WBVar02146649 | |||||
WBVar00636136 | ||||||
WBVar00636137 | ||||||
WBVar00636138 | ||||||
WBVar00333786 | ||||||
WBVar00333787 | ||||||
WBVar01499786 | ||||||
WBVar01498959 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (14) | ||||||
Contained_in_operon | CEOP1216 | |||||
Ortholog (35) | ||||||
Paralog (13) | ||||||
Structured_description | Concise_description | pas-3 encodes a proteasome subunit alpha type-4 that affects embryonic viability, growth, fertility, and locomotion. | Paper_evidence | WBPaper00004402 | ||
WBPaper00006395 | ||||||
Curator_confirmed | WBPerson48 | |||||
WBPerson1843 | ||||||
Date_last_updated | 09 Nov 2011 00:00:00 | |||||
Automated_description | Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in cytosol and nucleus. Predicted to be part of proteasome core complex, alpha-subunit complex. Is an ortholog of human PSMA4 (proteasome 20S subunit alpha 4). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y110A7A.14 | ||||
Corresponding_transcript | Y110A7A.14.1 | |||||
Other_sequence (116) | ||||||
Associated_feature | WBsf649139 | |||||
WBsf219369 | ||||||
Experimental_info | RNAi_result (27) | |||||
Expr_pattern | Expr1014892 | |||||
Expr1031857 | ||||||
Expr1158855 | ||||||
Expr2014742 | ||||||
Expr2032976 | ||||||
Drives_construct | WBCnstr00035794 | |||||
Construct_product | WBCnstr00035794 | |||||
Microarray_results (21) | ||||||
Expression_cluster (144) | ||||||
Interaction (171) | ||||||
Map_info (3) | ||||||
Reference | WBPaper00031224 | |||||
WBPaper00038491 | ||||||
WBPaper00048675 | ||||||
WBPaper00055090 | ||||||
WBPaper00056008 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |