WormBase Tree Display for Gene: WBGene00002043
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WBGene00002043 | SMap | S_parent | Sequence | C09G4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hyl | ||||||
Allele (76) | |||||||
Strain | WBStrain00031744 | ||||||
WBStrain00035687 | |||||||
WBStrain00040672 | |||||||
WBStrain00040673 | |||||||
WBStrain00040674 | |||||||
WBStrain00040676 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (19) | |||||||
Ortholog (51) | |||||||
Paralog | WBGene00006505 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00002044 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Concise_description | hyl-1 encodes a ceramide synthase orthologous to Saccharomyces cerevisiae Lag1p (longevity assurance gene), a protein preferentially expressed in young yeasts; by homology, HYL-1 is predicted to have several possible functions, including regulation of lipid, particularly ceramide, biosynthesis, regulation of lipid transport, and regulation of protein translocation in the endoplasmic reticulum. | Paper_evidence | WBPaper00003354 | |||
WBPaper00013113 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 04 Mar 2015 00:00:00 | ||||||
Automated_description | Predicted to enable sphingosine N-acyltransferase activity. Involved in regulation of locomotion. Located in axon. Expressed in motor neurons. Is an ortholog of human CERS6 (ceramide synthase 6). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C09G4.1a | |||||
C09G4.1b | |||||||
C09G4.1c | |||||||
Corresponding_CDS_history | C09G4.1c:wp274 | ||||||
Corresponding_transcript | C09G4.1a.1 | ||||||
C09G4.1b.1 | |||||||
C09G4.1c.1 | |||||||
Other_sequence (19) | |||||||
Associated_feature (13) | |||||||
Experimental_info | RNAi_result | WBRNAi00027871 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040226 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (8) | |||||||
Drives_construct | WBCnstr00002225 | ||||||
WBCnstr00036498 | |||||||
Construct_product | WBCnstr00017103 | ||||||
WBCnstr00036498 | |||||||
Regulate_expr_cluster | WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_downregulated | ||||||
WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated | |||||||
Microarray_results (22) | |||||||
Expression_cluster (142) | |||||||
Interaction (108) | |||||||
WBProcess | WBbiopr:00000121 | ||||||
WBbiopr:00000137 | |||||||
Map_info | Map | IV | Position | 3.90256 | Error | 0.001908 | |
Positive | Positive_clone | C09G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4267 | |||||
4430 | |||||||
Pseudo_map_position | |||||||
Reference (19) | |||||||
Picture | WBPicture0000013061 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |