WormBase Tree Display for Gene: WBGene00001711
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WBGene00001711 | Evidence | Paper_evidence | WBPaper00003717 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T16G1 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | grl | ||||||
Allele (32) | |||||||
Strain | WBStrain00032742 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (21) | |||||||
Paralog (32) | |||||||
Structured_description | Concise_description | grl-2 encodes a hedgehog-like protein, with an N-terminal signalsequence, a central proline-rich low-complexity region, and a C-terminalGround-like (Grl) domain; GRL-2 is expressed in neurons, amphid socketcells, and other cells; the Grl domain is predicted to form acysteine-crosslinked protein involved in intercellular signalling, andit has subtle similarity to the N-terminal Hedge domain of HEDGEHOGproteins. | Paper_evidence | WBPaper00003717 | |||
WBPaper00006525 | |||||||
WBPaper00026841 | |||||||
WBPaper00027263 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 05 Nov 2006 00:00:00 | ||||||
Automated_description | Expressed in head. Is predicted to encode a protein with the following domain: Ground-like domain. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T16G1.8 | |||||
Corresponding_transcript | T16G1.8.1 | ||||||
Other_sequence | Acan_isotig20773 | ||||||
OF01472 | |||||||
OFC01293_1 | |||||||
PPC16416_1 | |||||||
Dviv_isotig26866 | |||||||
Associated_feature | WBsf661946 | ||||||
WBsf232718 | |||||||
Experimental_info | RNAi_result | WBRNAi00018774 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035615 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053418 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4441 | ||||||
Expr6701 | |||||||
Expr1013222 | |||||||
Expr1031024 | |||||||
Expr1156993 | |||||||
Expr2012265 | |||||||
Expr2030501 | |||||||
Drives_construct | WBCnstr00003017 | ||||||
WBCnstr00012005 | |||||||
WBCnstr00036749 | |||||||
Construct_product | WBCnstr00036749 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (141) | |||||||
Interaction | WBInteraction000227263 | ||||||
WBInteraction000335920 | |||||||
WBInteraction000381008 | |||||||
WBInteraction000431470 | |||||||
WBInteraction000447704 | |||||||
WBInteraction000448991 | |||||||
WBInteraction000465586 | |||||||
Map_info | Map | V | Position | 4.74272 | Error | 0.001987 | |
Positive | Positive_clone | T16G1 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00003717 | ||||||
WBPaper00028754 | |||||||
WBPaper00031588 | |||||||
WBPaper00052629 | |||||||
WBPaper00064105 | |||||||
Remark | ground-like gene, contains ground-like domain, hedgehog-related | Paper_evidence | WBPaper00003717 | ||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |