WormBase Tree Display for Gene: WBGene00001239
expand all nodes | collapse all nodes | view schema
WBGene00001239 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F56H11 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | elo-1 | Person_evidence | WBPerson79 | |||||
Sequence_name | F56H11.4 | ||||||||
Molecular_name | F56H11.4a | ||||||||
F56H11.4a.1 | |||||||||
CE05979 | |||||||||
F56H11.4b | |||||||||
CE47981 | |||||||||
F56H11.4b.1 | |||||||||
Other_name (3) | |||||||||
Public_name | elo-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | elo | ||||||||
Allele (41) | |||||||||
Strain | WBStrain00003343 | ||||||||
WBStrain00035534 | |||||||||
WBStrain00004008 | |||||||||
WBStrain00053449 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (45) | |||||||||
Paralog | WBGene00001240 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00001241 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001242 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001247 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001245 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001244 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001243 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001246 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | elo-1 encodes a component of C-18 polyunsaturated fatty acid (PUFA) elongase that is required for normal elongation of n-6 and n-3 20-carbon PUFA in vivo; ELO-1 is a condensing enzyme that elongates n-6 and n-7 (and, with less efficiency, n-3) series C18 PUFAs. | Paper_evidence | WBPaper00002597 | |||||
WBPaper00004162 | |||||||||
WBPaper00004553 | |||||||||
WBPaper00005233 | |||||||||
WBPaper00005728 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable fatty acid elongase activity. Involved in unsaturated fatty acid biosynthetic process. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56H11.4a | |||||||
F56H11.4b | |||||||||
Corresponding_transcript (2) | |||||||||
Other_sequence (58) | |||||||||
Associated_feature | WBsf646238 | ||||||||
WBsf997434 | |||||||||
WBsf1017974 | |||||||||
WBsf228840 | |||||||||
WBsf228841 | |||||||||
WBsf228842 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Chronogram219 | ||||||||
Expr6235 | |||||||||
Expr1019784 | |||||||||
Expr1030785 | |||||||||
Expr1152525 | |||||||||
Expr2011278 | |||||||||
Expr2029514 | |||||||||
Drives_construct | WBCnstr00003814 | ||||||||
WBCnstr00037020 | |||||||||
Construct_product | WBCnstr00037020 | ||||||||
Microarray_results (27) | |||||||||
Expression_cluster (147) | |||||||||
Interaction (98) | |||||||||
WBProcess | WBbiopr:00000121 | ||||||||
Map_info | Map | IV | Position | 4.29121 | Error | 0.001669 | |||
Positive | Positive_clone | F56H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4280 | |||||||
Pseudo_map_position | |||||||||
Reference (24) | |||||||||
Remark | Sequence connection from [Watts JL, Browse JA] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |