WormBase Tree Display for Gene: WBGene00001231
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WBGene00001231 | Evidence | Person_evidence | WBPerson599 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C41D11 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | eif-3.H | |||||||
Sequence_name | C41D11.2 | ||||||||
Molecular_name | C41D11.2 | ||||||||
C41D11.2.1 | |||||||||
CE29220 | |||||||||
Other_name | CELE_C41D11.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | eif-3.H | ||||||||
DB_info | Database | AceView | gene | 1F13 | |||||
WormQTL | gene | WBGene00001231 | |||||||
WormFlux | gene | WBGene00001231 | |||||||
NDB | locus_tag | CELE_C41D11.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001231|UniProtKB=O01974 | |||||||
family | PTHR10410 | ||||||||
NCBI | gene | 172044 | |||||||
RefSeq | protein | NM_058969.5 | |||||||
SwissProt | UniProtAcc | O01974 | |||||||
TREEFAM | TREEFAM_ID | TF101504 | |||||||
UniProt_GCRP | UniProtAcc | O01974 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | eif | ||||||||
Allele (35) | |||||||||
Strain | WBStrain00001189 | ||||||||
WBStrain00001416 | |||||||||
WBStrain00001542 | |||||||||
WBStrain00001543 | |||||||||
WBStrain00036124 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00000817 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00004467 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018135 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable metallopeptidase activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in formation of cytoplasmic translation initiation complex. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic 43S preinitiation complex; eukaryotic translation initiation factor 3 complex; and polysomal ribosome. Human ortholog(s) of this gene implicated in breast cancer and prostate carcinoma. Is an ortholog of human EIF3H (eukaryotic translation initiation factor 3 subunit H). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10286 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3273) | ||||
DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3273) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3273) | ||||||
Molecular_info | Corresponding_CDS | C41D11.2 | |||||||
Corresponding_transcript | C41D11.2.1 | ||||||||
Other_sequence (51) | |||||||||
Associated_feature | WBsf643216 | ||||||||
WBsf643217 | |||||||||
WBsf217531 | |||||||||
WBsf217532 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024792 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003124 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00114605 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042285 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070968 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00111908 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024791 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066086 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116711 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram178 | ||||||||
Chronogram1397 | |||||||||
Chronogram1990 | |||||||||
Expr5481 | |||||||||
Expr5482 | |||||||||
Expr1021959 | |||||||||
Expr1030779 | |||||||||
Expr1146276 | |||||||||
Expr2011258 | |||||||||
Expr2029494 | |||||||||
Drives_construct (2) | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (141) | |||||||||
Interaction (137) | |||||||||
Map_info | Map | I | Position | -1.30523 | Error | 0.000936 | |||
Positive | Positive_clone | C41D11 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5247 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027281 | ||||||||
WBPaper00028984 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
Remark (2) | |||||||||
Method | Gene |