WormBase Tree Display for Gene: WBGene00001151
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| WBGene00001151 | Evidence | Person_evidence | WBPerson3205 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Author_evidence | Van Gilst M | ||||||||
| SMap | S_parent | Sequence | F38H4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ech-2 | |||||||
| Sequence_name | F38H4.8 | ||||||||
| Molecular_name | F38H4.8a | ||||||||
| F38H4.8a.1 | |||||||||
| CE17808 | |||||||||
| F38H4.8b | |||||||||
| CE10072 | |||||||||
| F38H4.8b.1 | |||||||||
| F38H4.8c | |||||||||
| Other_name | CELE_F38H4.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ech-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ech | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00035615 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007280 | ||||||||
| 00007281 | |||||||||
| 00007282 | |||||||||
| 00007283 | |||||||||
| Contained_in_operon | CEOP4660 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00001152 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016325 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017301 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021296 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | ech-2 encodes an enoyl-coenzyme A hydratase, an enzyme involved in mitochondrial beta-oxidation of fatty acids. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 04 Jan 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable hydro-lyase activity. Predicted to be located in mitochondrion. Is an ortholog of human ECHDC3 (enoyl-CoA hydratase domain containing 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38H4.8a | |||||||
| F38H4.8b | |||||||||
| Corresponding_transcript | F38H4.8c | ||||||||
| F38H4.8a.1 | |||||||||
| F38H4.8b.1 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature | WBsf652258 | ||||||||
| WBsf668369 | |||||||||
| WBsf668370 | |||||||||
| WBsf981828 | |||||||||
| WBsf997979 | |||||||||
| WBsf1018291 | |||||||||
| WBsf230927 | |||||||||
| WBsf230928 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1016873 | ||||||||
| Expr1150623 | |||||||||
| Expr2011166 | |||||||||
| Expr2029402 | |||||||||
| Drives_construct | WBCnstr00037064 | ||||||||
| Construct_product | WBCnstr00037064 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | IV | Position | 5.32071 | Error | 0.001023 | |||
| Positive | Positive_clone | F38H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00029292 | |||||||||
| WBPaper00031648 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00047677 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065695 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
