WormBase Tree Display for Gene: WBGene00001152
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| WBGene00001152 | Evidence | Person_evidence | WBPerson3205 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Author_evidence | Van Gilst M | ||||||||
| SMap | S_parent | Sequence | F43H9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ech-3 | |||||||
| Sequence_name | F43H9.1 | ||||||||
| Molecular_name | F43H9.1a | ||||||||
| F43H9.1a.1 | |||||||||
| CE07245 | |||||||||
| F43H9.1b | |||||||||
| CE51352 | |||||||||
| F43H9.1b.1 | |||||||||
| Other_name | CELE_F43H9.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ech-3 | ||||||||
| DB_info | Database | AceView | gene | 5I503 | |||||
| WormQTL | gene | WBGene00001152 | |||||||
| WormFlux | gene | WBGene00001152 | |||||||
| NDB | locus_tag | CELE_F43H9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001152|UniProtKB=Q20376 | |||||||
| family | PTHR43802 | ||||||||
| NCBI | gene | 179180 | |||||||
| RefSeq | protein | NM_001322576.3 | |||||||
| NM_072665.7 | |||||||||
| TrEMBL | UniProtAcc | Q20376 | |||||||
| A0A131MCK1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20376 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ech | ||||||||
| Allele (13) | |||||||||
| Strain | WBStrain00055620 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002142 | ||||||||
| 00002143 | |||||||||
| 00105619 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00001151 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001154 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016325 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017301 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021296 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Involved in IRE1-mediated unfolded protein response. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43H9.1a | |||||||
| F43H9.1b | |||||||||
| Corresponding_transcript | F43H9.1a.1 | ||||||||
| F43H9.1b.1 | |||||||||
| Other_sequence | Oden_isotig15452 | ||||||||
| ACC19151_1 | |||||||||
| CRC05212_1 | |||||||||
| Acan_isotig11141 | |||||||||
| EX566835.1 | |||||||||
| ACC23410_1 | |||||||||
| Oden_isotig15451 | |||||||||
| CR01499 | |||||||||
| EX555914.1 | |||||||||
| Associated_feature | WBsf646979 | ||||||||
| WBsf232047 | |||||||||
| WBsf232048 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00075852 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102681 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014894 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032206 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102690 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047228 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8140 | ||||||||
| Expr12156 | |||||||||
| Expr1025131 | |||||||||
| Expr1030732 | |||||||||
| Expr1151088 | |||||||||
| Expr2011167 | |||||||||
| Expr2029403 | |||||||||
| Drives_construct | WBCnstr00013140 | ||||||||
| WBCnstr00020294 | |||||||||
| WBCnstr00037063 | |||||||||
| Construct_product | WBCnstr00037063 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (70) | |||||||||
| Map_info | Map | V | Position | 1.00331 | Error | 0.000462 | |||
| Positive | Positive_clone | F43H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00029292 | |||||||||
| WBPaper00031915 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00065140 | |||||||||
| WBPaper00065695 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
