WormBase Tree Display for Gene: WBGene00001152

WBGene00001152 Evidence: Person_evidence: WBPerson3205
    Author_evidence: Van Gilst M
  SMap: S_parent: Sequence: F43H9
  Identity: Version: 1
    Name: CGC_name: ech-3
      Sequence_name: F43H9.1
      Molecular_name: F43H9.1a
        F43H9.1a.1
        CE07245
        F43H9.1b
        CE51352
        F43H9.1b.1
      Other_name: CELE_F43H9.1 Accession_evidence: NDB BX284605
      Public_name: ech-3
    DB_info: Database: AceView gene 5I503
        WormQTL gene WBGene00001152
        WormFlux gene WBGene00001152
        NDB locus_tag CELE_F43H9.1
        Panther gene CAEEL|WormBase=WBGene00001152|UniProtKB=Q20376
          family PTHR43802
        NCBI gene 179180
        RefSeq protein NM_001322576.3
            NM_072665.7
        TrEMBL UniProtAcc Q20376
            A0A131MCK1
        UniProt_GCRP UniProtAcc Q20376
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:23 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ech
    Allele (13)
    Strain: WBStrain00055620
    RNASeq_FPKM (74)
    GO_annotation: 00002142
      00002143
      00105619
    Ortholog (29)
    Paralog: WBGene00001151 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001154 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001155 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001156 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007130 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016325 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017301 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019022 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021296 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F43H9.1a
      F43H9.1b
    Corresponding_transcript: F43H9.1a.1
      F43H9.1b.1
    Other_sequence: Oden_isotig15452
      ACC19151_1
      CRC05212_1
      Acan_isotig11141
      EX566835.1
      ACC23410_1
      Oden_isotig15451
      CR01499
      EX555914.1
    Associated_feature: WBsf646979
      WBsf232047
      WBsf232048
  Experimental_info: RNAi_result: WBRNAi00075852 Inferred_automatically: RNAi_primary
      WBRNAi00102681 Inferred_automatically: RNAi_primary
      WBRNAi00102672 Inferred_automatically: RNAi_primary
      WBRNAi00014894 Inferred_automatically: RNAi_primary
      WBRNAi00032206 Inferred_automatically: RNAi_primary
      WBRNAi00102690 Inferred_automatically: RNAi_primary
      WBRNAi00102582 Inferred_automatically: RNAi_primary
      WBRNAi00047228 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8140
      Expr12156
      Expr1025131
      Expr1030732
      Expr1151088
      Expr2011167
      Expr2029403
    Drives_construct: WBCnstr00013140
      WBCnstr00020294
      WBCnstr00037063
    Construct_product: WBCnstr00037063
    Microarray_results (19)
    Expression_cluster (97)
    Interaction: WBInteraction000139754
      WBInteraction000139755
      WBInteraction000139756
      WBInteraction000139799
      WBInteraction000139802
      WBInteraction000139899
      WBInteraction000139923
      WBInteraction000139972
      WBInteraction000140151
      WBInteraction000140152
      WBInteraction000140423
      WBInteraction000140708
      WBInteraction000141211
      WBInteraction000142004
      WBInteraction000143047
      WBInteraction000143363
      WBInteraction000161268
      WBInteraction000163508
      WBInteraction000163800
      WBInteraction000180557
      WBInteraction000185210
      WBInteraction000210647
      WBInteraction000214251
      WBInteraction000220449
      WBInteraction000222661
      WBInteraction000226323
      WBInteraction000226324
      WBInteraction000229526
      WBInteraction000237334
      WBInteraction000238748
      WBInteraction000238749
      WBInteraction000248974
      WBInteraction000248975
      WBInteraction000249334
      WBInteraction000256017
      WBInteraction000268216
      WBInteraction000272128
      WBInteraction000274497
      WBInteraction000277343
      WBInteraction000283344
      WBInteraction000283345
      WBInteraction000283346
      WBInteraction000283347
      WBInteraction000283349
      WBInteraction000291578
      WBInteraction000294814
      WBInteraction000294815
      WBInteraction000313824
      WBInteraction000313843
      WBInteraction000320732
      WBInteraction000320733
      WBInteraction000354323
      WBInteraction000366072
      WBInteraction000368547
      WBInteraction000370847
      WBInteraction000378310
      WBInteraction000389572
      WBInteraction000419804
      WBInteraction000425614
      WBInteraction000425622
      WBInteraction000431681
      WBInteraction000432828
      WBInteraction000464213
      WBInteraction000465329
      WBInteraction000466284
      WBInteraction000471661
      WBInteraction000473159
      WBInteraction000473483
      WBInteraction000503668
      WBInteraction000525040
  Map_info: Map: V Position: 1.00331 Error: 0.000462
    Positive: Positive_clone: F43H9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026800
    WBPaper00029292
    WBPaper00031915
    WBPaper00042257
    WBPaper00065140
    WBPaper00065695
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene