WormBase Tree Display for Gene: WBGene00000592
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WBGene00000592 | Evidence | CGC_data_submission | ||||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F08H9 | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | coh | |||||
Allele (53) | ||||||
Legacy_information | [J. Loidl] no RNAi phenotype found. Name assigned on the basis of sequence homology | |||||
(F08H9.1) is homolog to the Rad21/Scc1/Rec8 family of cohesion proteins with known members in C. elegans, S. cerevisiae, S. pombe, A. thaliana and vertebrates. R-S-R is the acronym of the founder family | ||||||
Strain | WBStrain00035161 | |||||
WBStrain00035162 | ||||||
WBStrain00035163 | ||||||
WBStrain00035164 | ||||||
WBStrain00035528 | ||||||
WBStrain00055740 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00063986 | |||||
Ortholog (20) | ||||||
Paralog | WBGene00021560 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
Structured_description | Concise_description | coh-3 encodes a member of the Rad21/Rec8-like family of cohesion proteins known as kleisins; COH-3, along with its paralogs REC-8 and COH-4, function as members of a meiotic cohesin complex that mediates sister chromatid cohesion; coh-3 transcripts are expressed in the germline. | Paper_evidence | WBPaper00004722 | ||
WBPaper00005330 | ||||||
WBPaper00005486 | ||||||
WBPaper00005654 | ||||||
WBPaper00034684 | ||||||
Curator_confirmed | WBPerson48 | |||||
WBPerson1843 | ||||||
Date_last_updated | 29 Nov 2010 00:00:00 | |||||
Automated_description | Involved in meiotic sister chromatid cohesion. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F08H9.1 | ||||
Corresponding_CDS_history | F08H9.1:wp111 | |||||
Corresponding_transcript | F08H9.1.1 | |||||
Other_sequence | CR12282 | |||||
CRC05466_1 | ||||||
CBC13933_1 | ||||||
Associated_feature | WBsf1002022 | |||||
WBsf1002023 | ||||||
WBsf1002024 | ||||||
WBsf1020844 | ||||||
WBsf1020845 | ||||||
Experimental_info | RNAi_result (15) | |||||
Expr_pattern | Expr11960 | |||||
Expr1027870 | ||||||
Expr1030347 | ||||||
Expr1148024 | ||||||
Expr2010298 | ||||||
Expr2028540 | ||||||
Drives_construct | WBCnstr00037442 | |||||
Construct_product | WBCnstr00037442 | |||||
Antibody | WBAntibody00002562 | |||||
WBAntibody00002687 | ||||||
Microarray_results (19) | ||||||
Expression_cluster (123) | ||||||
Interaction (28) | ||||||
Map_info (4) | ||||||
Reference (22) | ||||||
Remark | Sequence connection from [Loidl J] | |||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |