WormBase Tree Display for Gene: WBGene00000591
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| WBGene00000591 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K08A8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | coh-1 | |||||||
| Sequence_name | K08A8.3 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | rad-21.2 | ||||||||
| CELE_K08A8.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | coh-1 | ||||||||
| DB_info | Database | AceView | gene | XI84 | |||||
| WormQTL | gene | WBGene00000591 | |||||||
| WormFlux | gene | WBGene00000591 | |||||||
| NDB | locus_tag | CELE_K08A8.3 | |||||||
| Panther | gene | CAEEL|Gene_ORFName=CELE_K08A8.3|UniProtKB=A0A131MBD0 | |||||||
| family | PTHR12585 | ||||||||
| NCBI | gene | 181003 | |||||||
| RefSeq | protein | NM_001322622.4 | |||||||
| NM_076861.8 | |||||||||
| NM_001322623.4 | |||||||||
| NM_001381024.1 | |||||||||
| TrEMBL | UniProtAcc | A0A131MBB4 | |||||||
| A0A131MBD0 | |||||||||
| A0A131MCR9 | |||||||||
| A0A131MBV3 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A131MBD0 | |||||||
| OMIM | gene | 606462 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | coh | ||||||||
| Allele (159) | |||||||||
| Legacy_information | Paralogue of S.pombe rad21 | ||||||||
| [J. Loidl] RNAi phenotypes\: ~80% embryo lethality, HIM (~2% males); protein localizes to somatic nuclei of the embryo and the distal tip cell of the gonad | |||||||||
| (K08A8.3) is homolog to the Rad21/Scc1/Rec8 family of cohesion proteins with known members in S. cerevisiae, S. pombe, A. thaliana and vertebrates. R-S-R is the acronym of the founder family | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001983 | ||||||||
| 00001984 | |||||||||
| 00001985 | |||||||||
| 00001986 | |||||||||
| 00001991 | |||||||||
| 00001992 | |||||||||
| 00107606 | |||||||||
| 00107607 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00004737 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0080508 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||
| DOID:0050866 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||||
| DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||||
| DOID:0080199 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||||
| DOID:1380 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9811) | ||||||
| Molecular_info | Corresponding_CDS | K08A8.3a | |||||||
| K08A8.3b | |||||||||
| K08A8.3c | |||||||||
| K08A8.3d | |||||||||
| Corresponding_CDS_history | K08A8.3:wp252 | ||||||||
| Corresponding_transcript | K08A8.3a.1 | ||||||||
| K08A8.3b.1 | |||||||||
| K08A8.3c.1 | |||||||||
| K08A8.3d.1 | |||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf670724 | ||||||||
| WBsf1005848 | |||||||||
| WBsf1005849 | |||||||||
| WBsf1005850 | |||||||||
| WBsf1005851 | |||||||||
| WBsf1005852 | |||||||||
| WBsf1023254 | |||||||||
| WBsf1023255 | |||||||||
| WBsf1023256 | |||||||||
| WBsf1023257 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1349 | ||||||||
| Expr2580 | |||||||||
| Expr13113 | |||||||||
| Expr1026085 | |||||||||
| Expr1030346 | |||||||||
| Expr1153915 | |||||||||
| Expr2010297 | |||||||||
| Expr2028539 | |||||||||
| Drives_construct | WBCnstr00037443 | ||||||||
| Construct_product | WBCnstr00037443 | ||||||||
| Antibody | WBAntibody00000372 | ||||||||
| WBAntibody00000643 | |||||||||
| WBAntibody00000644 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (81) | |||||||||
| Map_info (4) | |||||||||
| Reference | WBPaper00005937 | ||||||||
| WBPaper00012000 | |||||||||
| WBPaper00018377 | |||||||||
| WBPaper00026804 | |||||||||
| WBPaper00027033 | |||||||||
| WBPaper00031300 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Sugimoto A] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
