WormBase Tree Display for Gene: WBGene00000562
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WBGene00000562 | SMap | S_parent | Sequence | F14H8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | cng-1 | Person_evidence | WBPerson746 | |||||
Sequence_name | F14H8.6 | ||||||||
Molecular_name | F14H8.6b | ||||||||
F14H8.6a | |||||||||
CE41791 | |||||||||
F14H8.6b.1 | |||||||||
F14H8.6b.2 | |||||||||
F14H8.6c | |||||||||
Other_name | CELE_F14H8.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cng-1 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00000562 | |||||
WormFlux | gene | WBGene00000562 | |||||||
NDB | locus_tag | CELE_F14H8.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000562|UniProtKB=A8WI01 | |||||||
family | PTHR45638 | ||||||||
NCBI | gene | 180004 | |||||||
RefSeq | protein | NR_070019.1 | |||||||
NR_070020.1 | |||||||||
NM_001129446.5 | |||||||||
TrEMBL | UniProtAcc | A8WI01 | |||||||
UniProt_GCRP | UniProtAcc | A8WI01 | |||||||
RNAcentral | URSid | URS000012A901 | |||||||
URS0000452304 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cng | ||||||||
Allele (95) | |||||||||
Strain | WBStrain00023530 | ||||||||
WBStrain00023534 | |||||||||
WBStrain00023535 | |||||||||
WBStrain00023537 | |||||||||
WBStrain00033082 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (21) | |||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00000487 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00006526 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006525 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00000563 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00022295 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00006830 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Involved in negative regulation of cGMP-mediated signaling; response to oxygen levels; and sensory perception. Located in neuronal cell body. Expressed in amphid neurons and head neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F14H8.6b | |||||||
Corresponding_CDS_history | F14H8.6:wp20 | ||||||||
F14H8.6a:wp230 | |||||||||
F14H8.6b:wp184 | |||||||||
F14H8.6c:wp230 | |||||||||
Corresponding_transcript | F14H8.6a | ||||||||
F14H8.6c | |||||||||
F14H8.6b.1 | |||||||||
F14H8.6b.2 | |||||||||
Other_sequence | FG353711.1 | ||||||||
FG348838.1 | |||||||||
FG349551.1 | |||||||||
FG351513.1 | |||||||||
HBC16564_1 | |||||||||
EX916571.1 | |||||||||
FG585019.1 | |||||||||
FG347412.1 | |||||||||
FG351655.1 | |||||||||
Associated_feature | WBsf653425 | ||||||||
WBsf669761 | |||||||||
WBsf669762 | |||||||||
WBsf669763 | |||||||||
WBsf1002213 | |||||||||
WBsf235017 | |||||||||
Experimental_info | RNAi_result | WBRNAi00013332 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013331 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044665 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016298 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065517 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030976 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065516 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088790 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102083 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8625 | ||||||||
Expr9241 | |||||||||
Expr11199 | |||||||||
Expr1019166 | |||||||||
Expr1030339 | |||||||||
Expr1148638 | |||||||||
Expr2010272 | |||||||||
Expr2028514 | |||||||||
Drives_construct | WBCnstr00013404 | ||||||||
WBCnstr00013847 | |||||||||
WBCnstr00018215 | |||||||||
WBCnstr00037450 | |||||||||
Construct_product | WBCnstr00013404 | ||||||||
WBCnstr00037450 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (226) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | V | Position | 7.17589 | Error | 0.005638 | |||
Positive | Positive_clone | F14H8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |