WormBase Tree Display for Gene: WBGene00000282
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WBGene00000282 | SMap | S_parent | Sequence | R01E6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | cah-4 | |||||||
Sequence_name | R01E6.3 | ||||||||
Molecular_name | R01E6.3a | ||||||||
R01E6.3a.1 | |||||||||
CE29433 | |||||||||
R01E6.3b | |||||||||
CE29434 | |||||||||
R01E6.3b.1 | |||||||||
Other_name | CELE_R01E6.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | cah-4 | ||||||||
DB_info | Database | AceView | gene | XO161 | |||||
WormQTL | gene | WBGene00000282 | |||||||
WormFlux | gene | WBGene00000282 | |||||||
NDB | locus_tag | CELE_R01E6.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000282|UniProtKB=Q21614 | |||||||
family | PTHR18952 | ||||||||
NCBI | gene | 181478 | |||||||
RefSeq | protein | NM_077864.6 | |||||||
NM_077863.9 | |||||||||
TrEMBL | UniProtAcc | Q8WQD8 | |||||||
Q21614 | |||||||||
UniProt_GCRP | UniProtAcc | Q21614 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cah | ||||||||
Allele (38) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00000279 | Caenorhabditis elegans | From_analysis (3) | ||||||
WBGene00000280 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00000281 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00000283 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00000284 | Caenorhabditis elegans | From_analysis (3) | |||||||
Structured_description | Concise_description | cah-4 encodes a carbonic anhydrase homolog, which is rather divergent from other such homologs in C. elegans (with at most 38% identity to any other carbonic anhydrase, in or out of C. elegans); it is individually dispensable for viability and for grossly normal postembryonic morphology, and thus may have a more subtle biological function than the basic cytoprotective functions expected for carbonic anhydrases. | Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables carbonate dehydratase activity. Involved in small molecule metabolic process. Predicted to be located in cytoplasm. Expressed in several structures, including body wall musculature; enteric muscle; excretory cell; rectal muscle; and somatic nervous system. Is an ortholog of several human genes including CA1 (carbonic anhydrase 1); CA3 (carbonic anhydrase 3); and CA5A (carbonic anhydrase 5A). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Modifies_disease | DOID:11723 | ||||||||
Modifies_disease_in_annotation | WBDOannot00000425 | ||||||||
WBDOannot00000430 | |||||||||
WBDOannot00000431 | |||||||||
Molecular_info | Corresponding_CDS | R01E6.3a | |||||||
R01E6.3b | |||||||||
Corresponding_CDS_history | R01E6.3:wp65 | ||||||||
Corresponding_transcript | R01E6.3a.1 | ||||||||
R01E6.3b.1 | |||||||||
Other_sequence (37) | |||||||||
Associated_feature | WBsf648678 | ||||||||
WBsf716638 | |||||||||
WBsf1007641 | |||||||||
WBsf1024250 | |||||||||
WBsf236581 | |||||||||
WBsf236582 | |||||||||
WBsf236583 | |||||||||
WBsf236584 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | X | Position | 12.7093 | Error | 0.004543 | |||
Positive | Positive_clone | R01E6 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Sequence connection from [Hewett-Emmett D] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |