WormBase Tree Display for Gene: WBGene00000283
expand all nodes | collapse all nodes | view schema
| WBGene00000283 | SMap | S_parent | Sequence | R173 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cah-5 | |||||||
| Sequence_name | R173.1 | ||||||||
| Molecular_name | R173.1 | ||||||||
| R173.1.1 | |||||||||
| CE36560 | |||||||||
| Other_name | CELE_R173.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cah-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cah | ||||||||
| Allele (64) | |||||||||
| Strain | WBStrain00032947 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (85) | |||||||||
| Paralog | WBGene00000279 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000281 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000282 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000284 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | cah-5 encodes a member of the carbonic anhydrase family. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable carbonate dehydratase activity. Predicted to be involved in one-carbon metabolic process. Predicted to be located in cytoplasm. Expressed in several structures, including body wall musculature; head neurons; intestine; pharynx; and vulva. Human ortholog(s) of this gene implicated in several diseases, including autosomal recessive osteopetrosis 3; cerebellar ataxia, mental retardation and dysequlibrium syndrome; and colorectal carcinoma. Is an ortholog of human CA1 (carbonic anhydrase 1) and CA13 (carbonic anhydrase 13). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3883 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1373) | ||||
| DOID:0050997 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1382) | ||||||
| DOID:0110941 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1373) | ||||||
| DOID:13533 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1373) | ||||||
| DOID:10584 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1375) | ||||||
| DOID:0080199 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1373) | ||||||
| Molecular_info | Corresponding_CDS | R173.1 | |||||||
| Corresponding_CDS_history | R173.1:wp98 | ||||||||
| R173.1:wp121 | |||||||||
| Corresponding_transcript | R173.1.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf1005710 | ||||||||
| WBsf1023171 | |||||||||
| WBsf1023172 | |||||||||
| WBsf235896 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052005 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052006 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110321 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9210 | ||||||||
| Expr9945 | |||||||||
| Expr15871 | |||||||||
| Expr1012100 | |||||||||
| Expr1030185 | |||||||||
| Expr1155647 | |||||||||
| Expr2009699 | |||||||||
| Expr2027938 | |||||||||
| Drives_construct | WBCnstr00013799 | ||||||||
| WBCnstr00014954 | |||||||||
| WBCnstr00015740 | |||||||||
| WBCnstr00037606 | |||||||||
| Construct_product | WBCnstr00015740 | ||||||||
| WBCnstr00037606 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | X | Position | -1.91822 | Error | 0.012966 | |||
| Positive | Positive_clone | R173 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00037599 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040475 | |||||||||
| WBPaper00040634 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Hewett-Emmett D] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
