WormBase Tree Display for Gene: WBGene00000122
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| WBGene00000122 | SMap | S_parent | Sequence | M18 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | aly-3 | Person_evidence | WBPerson297 | |||||
| WBPerson4981 | |||||||||
| Sequence_name | M18.7 | ||||||||
| Molecular_name | M18.7a | ||||||||
| M18.7a.1 | |||||||||
| CE06198 | |||||||||
| M18.7b | |||||||||
| Other_name | CELE_M18.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | aly-3 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00000122 | |||||
| WormFlux | gene | WBGene00000122 | |||||||
| NDB | locus_tag | CELE_M18.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000122|UniProtKB=Q21559 | |||||||
| family | PTHR19965 | ||||||||
| NCBI | gene | 178157 | |||||||
| RefSeq | protein | NR_003454.1 | |||||||
| NM_001083228.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF313312 | |||||||
| TrEMBL | UniProtAcc | Q21559 | |||||||
| UniProt_GCRP | UniProtAcc | Q21559 | |||||||
| RNAcentral | URSid | URS0000253FBA | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aly | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072102 | ||||||||
| 00072103 | |||||||||
| 00072104 | |||||||||
| 00072105 | |||||||||
| 00106836 | |||||||||
| Contained_in_operon | CEOP4496 | ||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00000120 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000121 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015329 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | M18.7a | |||||||
| Corresponding_transcript | M18.7b | ||||||||
| M18.7a.1 | |||||||||
| Other_sequence (31) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info (7) | |||||||||
| Map_info | Map | IV | Position | 5.72967 | Error | 0.002435 | |||
| Positive | Positive_clone | M18 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5514 | |||||||
| 5519 | |||||||||
| 5280 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00013477 | ||||||||
| WBPaper00029295 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063792 | |||||||||
| WBPaper00064012 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
