WormBase Tree Display for Gene: WBGene00000033
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| WBGene00000033 | SMap | S_parent | Sequence | F35A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | abu-10 | Person_evidence | WBPerson530 | |||||
| Sequence_name | F35A5.3 | ||||||||
| Molecular_name | F35A5.3 | ||||||||
| F35A5.3.1 | |||||||||
| CE04487 | |||||||||
| Other_name | pqn-33 | CGC_data_submission | |||||||
| CELE_F35A5.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | abu-10 | ||||||||
| DB_info | Database | AceView | gene | XE417 | |||||
| WormQTL | gene | WBGene00000033 | |||||||
| WormFlux | gene | WBGene00000033 | |||||||
| NDB | locus_tag | CELE_F35A5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000033|UniProtKB=Q20002 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 185248 | |||||||
| RefSeq | protein | NM_076258.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315932 | |||||||
| TrEMBL | UniProtAcc | Q20002 | |||||||
| UniProt_GCRP | UniProtAcc | Q20002 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abu | ||||||||
| Allele | WBVar01136306 | ||||||||
| WBVar01136307 | |||||||||
| WBVar01136308 | |||||||||
| WBVar02139077 | |||||||||
| WBVar00499913 | |||||||||
| WBVar00244548 | |||||||||
| WBVar01499636 | |||||||||
| WBVar01980213 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066794 | ||||||||
| 00066795 | |||||||||
| 00066796 | |||||||||
| 00066797 | |||||||||
| 00066798 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Concise_description | abu-10 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and a cysteine-rich repeat (DUF139); abu-10 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-10 may function within the ER to protect the organism from damage by improperly folded nascent protein. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00005432 | |||||||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00013108 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in endoplasmic reticulum unfolded protein response. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35A5.3 | |||||||
| Corresponding_transcript | F35A5.3.1 | ||||||||
| Other_sequence | CRC02300_1 | ||||||||
| CR05945 | |||||||||
| CRC04596_1 | |||||||||
| Associated_feature | WBsf647972 | ||||||||
| WBsf718549 | |||||||||
| WBsf1004724 | |||||||||
| WBsf1022675 | |||||||||
| WBsf1022676 | |||||||||
| WBsf235526 | |||||||||
| WBsf235527 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031739 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046266 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014279 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026547 | ||||||||
| Expr1030013 | |||||||||
| Expr1150156 | |||||||||
| Expr2009103 | |||||||||
| Expr2027339 | |||||||||
| Drives_construct | WBCnstr00037781 | ||||||||
| Construct_product | WBCnstr00037781 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (223) | |||||||||
| Interaction (73) | |||||||||
| WBProcess | WBbiopr:00000079 | ||||||||
| Map_info | Map | X | Position | -9.38459 | |||||
| Positive | Positive_clone | F35A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
