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WormBase Tree Display for Gene: WBGene00239007

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Name Class

WBGene00239007SMapS_parentSequenceOVOC_OM1b_111
IdentityVersion1
NameSequence_nameOVOC2198
Molecular_nameOVOC2198
OVOC2198.1
OVP11162
Public_nameOVOC2198
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010123.8246From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
269.146From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104110.841From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
14.8174From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
15.7877From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
17.3084From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
182.06From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
18.3816From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
2.56619From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
29.2676From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
3.25616From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
38.2585From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
6.23599From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
63.3981From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
6.73562From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
7.17405From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
86.8547From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
9.19367From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
WBls:0000107812.356From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081171.84From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
1208.44From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
1345.36From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
1655.79From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:0000664114.212From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
249.454From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
384.697From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00252916
OrthologWBGene00034836Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271001Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00015455Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018532Caenorhabditis elegansFrom_analysisWormBase-Compara
FL83_00775Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05993Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14794Oscheius tipulaeFrom_analysisWormBase-Compara
WBGene00276778Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans F47B7.1 and txt-9. In C. elegans, txt-9 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC2198
Corresponding_transcriptOVOC2198.1
Other_sequence (109)
MethodGene