WormBase Tree Display for Gene: WBGene00003924
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WBGene00003924 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y110A7A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pas | ||||||
Allele | WBVar02146649 | ||||||
WBVar00636136 | |||||||
WBVar00636137 | |||||||
WBVar00636138 | |||||||
WBVar00333786 | |||||||
WBVar00333787 | |||||||
WBVar01499786 | |||||||
WBVar01498959 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Contained_in_operon | CEOP1216 | ||||||
Ortholog (35) | |||||||
Paralog (13) | |||||||
Structured_description | Concise_description | pas-3 encodes a proteasome subunit alpha type-4 that affects embryonic viability, growth, fertility, and locomotion. | Paper_evidence | WBPaper00004402 | |||
WBPaper00006395 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1843 | |||||||
Date_last_updated | 09 Nov 2011 00:00:00 | ||||||
Automated_description | Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in cytosol and nucleus. Predicted to be part of proteasome core complex, alpha-subunit complex. Is an ortholog of human PSMA4 (proteasome 20S subunit alpha 4). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y110A7A.14 | |||||
Corresponding_transcript | Y110A7A.14.1 | ||||||
Other_sequence (116) | |||||||
Associated_feature | WBsf649139 | ||||||
WBsf219369 | |||||||
Experimental_info | RNAi_result | WBRNAi00026579 | Inferred_automatically | RNAi_primary | |||
WBRNAi00087110 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026583 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026578 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000117 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087158 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087112 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022801 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081321 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070973 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110732 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087196 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026582 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087109 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076755 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055315 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033403 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004525 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087143 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087222 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085756 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087111 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064471 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087144 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087145 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087142 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087159 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1014892 | ||||||
Expr1031857 | |||||||
Expr1158855 | |||||||
Expr2014742 | |||||||
Expr2032976 | |||||||
Drives_construct | WBCnstr00035794 | ||||||
Construct_product | WBCnstr00035794 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (144) | |||||||
Interaction (171) | |||||||
Map_info | Map | I | Position | -0.41002 | Error | 0.00058 | |
Positive | Positive_clone | Y110A7A | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00031224 | ||||||
WBPaper00038491 | |||||||
WBPaper00048675 | |||||||
WBPaper00055090 | |||||||
WBPaper00056008 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |