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WormBase Tree Display for Gene: WBGene00018839

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Name Class

WBGene00018839SMapS_parentSequenceF54H5
IdentityVersion1
NameSequence_nameF54H5.2
Molecular_nameF54H5.2a
F54H5.2a.1
CE01965
F54H5.2b
CE50342
F54H5.2c
CE50484
F54H5.2b.1
F54H5.2c.1
Other_nameF54H5.dCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_F54H5.2Accession_evidenceNDBBX284602
Public_nameF54H5.2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (21)
RNASeq_FPKM (74)
GO_annotation00001291
00001292
00050613
00050614
00050615
00123840
00123841
00123842
Ortholog (90)
ParalogWBGene00002202Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00002203Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004960Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007269Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007305Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007448Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007563Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007777Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007791Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008088Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008235Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008423Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008464Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008662Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008883Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008995Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009115Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009324Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009402Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010176Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010366Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010555Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010692Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010874Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010883Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011191Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011283Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011466Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012169Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012307Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012637Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012731Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013709Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013868Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00014007Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015030Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015629Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015634Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016111Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016388Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016421Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016513Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016541Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016673Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016765Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016946Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016963Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017050Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017714Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017725Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017802Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017803Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017895Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018004Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018122Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018123Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018178Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018202Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018203Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018301Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018745Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021639Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022102Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020072Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020071Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019642Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020381Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00020531Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022108Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022632Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021109Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019769Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020435Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019459Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021016Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022032Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022705Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022707Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019086Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020223Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019561Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019562Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019119Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015893Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019556Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in signal transduction. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 11. Is an ortholog of human TTBK1 (tau tubulin kinase 1) and TTBK2 (tau tubulin kinase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050961Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:19141)
Molecular_infoCorresponding_CDSF54H5.2a
F54H5.2b
F54H5.2c
Corresponding_transcriptF54H5.2a.1
F54H5.2b.1
F54H5.2c.1
Other_sequence (18)
Experimental_infoRNAi_resultWBRNAi00043267Inferred_automaticallyRNAi_primary
WBRNAi00012459Inferred_automaticallyRNAi_primary
WBRNAi00015673Inferred_automaticallyRNAi_primary
WBRNAi00032827Inferred_automaticallyRNAi_primary
WBRNAi00043268Inferred_automaticallyRNAi_primary
Expr_patternExpr1152191
Expr2004188
Expr2022408
Drives_constructWBCnstr00026251
Construct_productWBCnstr00026251
Microarray_results (12)
Expression_cluster (142)
InteractionWBInteraction000325067
WBInteraction000337935
WBInteraction000395069
WBInteraction000457859
Map_infoPositivePositive_cloneF54H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-0.0552751
ReferenceWBPaper00027258
MethodGene