WormBase Tree Display for Gene: WBGene00016541
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| WBGene00016541 | SMap | S_parent | Sequence | C39H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttbk-8.2 | Person_evidence | WBPerson555 | |||||
| WBPerson298 | |||||||||
| Laboratory_evidence | GNW | ||||||||
| Remark | A Wormbase user kindly pointed out the similarity between TTBK-2 and R13H9.5, which led us to review the entire class, resulting in several re-naming events | ||||||||
| Sequence_name | C39H7.1 | ||||||||
| Molecular_name | C39H7.1 | ||||||||
| C39H7.1.1 | |||||||||
| CE06942 | |||||||||
| Other_name | CELE_C39H7.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttbk-8.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jun 2022 09:37:14 | WBPerson21950 | Name_change | CGC_name | ttbk-8.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttbk | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (52) | |||||||||
| Paralog (93) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in signal transduction. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 11. Is an ortholog of human TTBK1 (tau tubulin kinase 1) and TTBK2 (tau tubulin kinase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050961 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19141) | ||||
| Molecular_info | Corresponding_CDS | C39H7.1 | |||||||
| Corresponding_transcript | C39H7.1.1 | ||||||||
| Other_sequence (41) | |||||||||
| Associated_feature | WBsf996559 | ||||||||
| WBsf996560 | |||||||||
| WBsf1017404 | |||||||||
| WBsf228324 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011799 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042233 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002170 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029698 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027068 | ||||||||
| Expr1146223 | |||||||||
| Expr2001545 | |||||||||
| Expr2019766 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (285) | |||||||||
| Interaction (244) | |||||||||
| Map_info | Map | IV | Position | 1.97401 | |||||
| Positive | Positive_clone | C39H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00057218 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
