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WormBase Tree Display for Gene: WBGene00001110

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Name Class

WBGene00001110EvidencePerson_evidenceWBPerson2345
SMapS_parentSequenceF38B7
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classduo
Allele (54)
RNASeq_FPKM (74)
GO_annotation00082182
00082183
00108285
00108286
Ortholog (20)
ParalogWBGene00009007Caenorhabditis elegansFrom_analysisPanther
WBGene00015249Caenorhabditis elegansFrom_analysisPanther
WBGene00001111Caenorhabditis elegansFrom_analysisTreeFam
WBGene00015422Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00001112Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000874Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006856Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007943Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008441Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008547Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009267Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010406Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010502Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011507Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011980Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013506Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019259Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020695Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020839Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022052Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable cysteine-type deubiquitinase activity. Is an ortholog of human OTUD1 (OTU deubiquitinase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF38B7.5
Corresponding_CDS_historyF38B7.5:wp95
F38B7.5:wp231
Corresponding_transcriptF38B7.5.1
Other_sequenceAB095019
CBC01724_1
CR06994
Experimental_infoRNAi_result (17)
Expr_patternExpr1021645
Expr1030708
Expr1150577
Expr2011114
Expr2029350
Drives_constructWBCnstr00037079
Construct_productWBCnstr00037079
Microarray_results (20)
Expression_cluster (135)
Interaction (36)
Map_infoMapVPosition3.20376Error0.001354
PositivePositive_cloneF38B7Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5449
Pseudo_map_position
Reference (5)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene