WormBase Tree Display for Gene: WBGene00011423
expand all nodes | collapse all nodes | view schema
WBGene00011423 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ipla-7 | Paper_evidence | WBPaper00041578 | |||
Person_evidence | WBPerson3094 | ||||||
Sequence_name | T04B2.5 | ||||||
Molecular_name | T04B2.5 | ||||||
T04B2.5.1 | |||||||
CE42657 | |||||||
T04B2.5.2 | |||||||
Other_name | CELE_T04B2.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | ipla-7 | ||||||
DB_info | Database | AceView | gene | 4K822 | |||
WormQTL | gene | WBGene00011423 | |||||
WormFlux | gene | WBGene00011423 | |||||
NDB | locus_tag | CELE_T04B2.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011423|UniProtKB=G5EF58 | |||||
family | PTHR24139 | ||||||
NCBI | gene | 177869 | |||||
RefSeq | protein | NM_001383178.1 | |||||
TREEFAM | TREEFAM_ID | TF319230 | |||||
TrEMBL | UniProtAcc | G5EF58 | |||||
UniProt_GCRP | UniProtAcc | G5EF58 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ipla | ||||||
Allele (82) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (32) | |||||||
Paralog | WBGene00011240 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | T04B2.5 encodes a phospholipase A2. | Paper_evidence | WBPaper00041578 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 13 Nov 2012 00:00:00 | ||||||
Automated_description | Predicted to enable calcium-independent phospholipase A2 activity and palmitoyl-CoA hydrolase activity. Predicted to be involved in positive regulation of ceramide biosynthetic process. Predicted to be located in mitochondrion. Expressed in intestine; pharyngeal-intestinal valve; pharynx; virL; and virR. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T04B2.5 | |||||
Corresponding_CDS_history | T04B2.5:wp191 | ||||||
Corresponding_transcript | T04B2.5.1 | ||||||
T04B2.5.2 | |||||||
Other_sequence | SS03204 | ||||||
ASC08385_1 | |||||||
PSC02786_1 | |||||||
GW406930.1 | |||||||
CRC02098_1 | |||||||
CBC03531_1 | |||||||
CR01039 | |||||||
Oden_isotig18527 | |||||||
CJC11305_1 | |||||||
JI171724.1 | |||||||
Dviv_isotig25518 | |||||||
CBC00700_1 | |||||||
Dviv_isotig18837 | |||||||
PPC09318_1 | |||||||
CR07583 | |||||||
ACC02217_1 | |||||||
CJC02236_1 | |||||||
SSC05089_1 | |||||||
Dviv_isotig18836 | |||||||
AS05547 | |||||||
BXC02205_1 | |||||||
PPC01790_1 | |||||||
PP02547 | |||||||
Associated_feature | WBsf997543 | ||||||
WBsf997544 | |||||||
WBsf997545 | |||||||
WBsf997546 | |||||||
WBsf1018040 | |||||||
WBsf230657 | |||||||
WBsf230658 | |||||||
WBsf230659 | |||||||
WBsf230660 | |||||||
WBsf230661 | |||||||
Experimental_info | RNAi_result | WBRNAi00052353 | Inferred_automatically | RNAi_primary | |||
WBRNAi00090637 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018122 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035125 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr442 | ||||||
Expr1024385 | |||||||
Expr1035027 | |||||||
Expr1155982 | |||||||
Expr2012812 | |||||||
Expr2031051 | |||||||
Drives_construct | WBCnstr00030668 | ||||||
Construct_product | WBCnstr00030668 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (186) | |||||||
Interaction (33) | |||||||
Map_info | Map | IV | Position | 4.47933 | |||
Positive | Positive_clone | T04B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00041578 | ||||||
WBPaper00055090 | |||||||
WBPaper00058996 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |