WormBase Tree Display for Gene: WBGene00011240
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| WBGene00011240 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mask-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | R11A8.7 | ||||||||
| Molecular_name (31) | |||||||||
| Other_name | CELE_R11A8.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mask-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Nov 2017 15:54:28 | WBPerson1983 | Name_change | CGC_name | mask-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mask | ||||||||
| Allele (132) | |||||||||
| Strain | WBStrain00002587 | ||||||||
| WBStrain00002978 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000370 | ||||||||
| 00000371 | |||||||||
| 00073304 | |||||||||
| 00073305 | |||||||||
| 00073306 | |||||||||
| 00073307 | |||||||||
| 00073308 | |||||||||
| 00118502 | |||||||||
| 00118503 | |||||||||
| Contained_in_operon | CEOP4376 | ||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00002069 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00006780 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00007252 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012124 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011423 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be located in cytoplasm. Expressed in head. Is an ortholog of human ANKHD1 (ankyrin repeat and KH domain containing 1); ANKHD1-EIF4EBP3 (ANKHD1-EIF4EBP3 readthrough); and ANKRD17 (ankyrin repeat domain 17). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11A8.7a | |||||||
| R11A8.7b | |||||||||
| R11A8.7c | |||||||||
| R11A8.7d | |||||||||
| R11A8.7e | |||||||||
| R11A8.7f | |||||||||
| R11A8.7g | |||||||||
| R11A8.7h | |||||||||
| R11A8.7i | |||||||||
| R11A8.7j | |||||||||
| Corresponding_CDS_history | R11A8.7a:wp199 | ||||||||
| R11A8.7b:wp199 | |||||||||
| Corresponding_transcript (11) | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (17) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017740 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051770 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002410 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram795 | ||||||||
| Expr6503 | |||||||||
| Expr6504 | |||||||||
| Expr1016787 | |||||||||
| Expr1034935 | |||||||||
| Expr1155433 | |||||||||
| Expr2005578 | |||||||||
| Expr2023797 | |||||||||
| Drives_construct | WBCnstr00003146 | ||||||||
| WBCnstr00004555 | |||||||||
| WBCnstr00030816 | |||||||||
| Construct_product | WBCnstr00030816 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction (36) | |||||||||
| Map_info | Map | IV | Position | 4.57953 | |||||
| Positive | Positive_clone | R11A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043670 | |||||||||
| WBPaper00046432 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
