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WormBase Tree Display for Gene: WBGene00000214

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Name Class

WBGene00000214EvidenceCGC_data_submission
SMapS_parentSequenceY39B6A
IdentityVersion1
NameCGC_nameasp-1Person_evidenceWBPerson184
Sequence_nameY39B6A.20
Molecular_nameY39B6A.20
Y39B6A.20.1
CE21681
Other_nameY39B6B.gCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y39B6A.20Accession_evidenceNDBBX284605
Public_nameasp-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classasp
Allele (35)
StrainWBStrain00001516
RNASeq_FPKM (74)
GO_annotation (18)
Ortholog (57)
ParalogWBGene00000217Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012680Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
WBGene00012682Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00012683Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019104Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00077655Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019105Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013973Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012681Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017678Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000218Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000219Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017881Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007605Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015700Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000215Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000216Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019619Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionasp-1 encodes a homolog of cathepsin D aspartic protease; it is transcribed exclusively in intestinal cells of the late embryo and early larvae and is not observed in older larvae or adults; ASP-1 is dispensable for neuronal degeneration.Paper_evidenceWBPaper00004299
WBPaper00005513
Curator_confirmedWBPerson324
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Located in cytoplasm and external side of apical plasma membrane. Expressed in intestinal cell and intestine. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human PGC (progastricsin) and REN (renin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (17)
Molecular_infoCorresponding_CDSY39B6A.20
Corresponding_transcriptY39B6A.20.1
Other_sequenceAF208526
FC811304.1
FC815761.1
PTC03231_2
CR11172
AE04919
FC811115.1
FC815988.1
PPC01573_1
ACC31941_1
CR12213
Oden_isotig11101
SRC01322_1
AYC03127_1
Oden_isotig07359
FC810452.1
PP00428
ACC09102_1
BXC05035_1
CGC00281_1
FC811434.1
FC817445.1
FC815872.1
FC811388.1
Oden_isotig23522
FC811873.1
FC816592.1
EX544263.1
CBC12579_1
PT01760
PT00780
Oden_isotig07362
PT02968
FC816811.1
FC814872.1
EV850603.1
ACC04670_1
BM052023.1
GW408513.1
FC810562.1
Oden_isotig07360
AYC04015_1
CR01589
ACC04649_1
FD514304.1
FD516675.1
FC811863.1
FC815112.1
PSC01765_1
CR10780
PPC05243_1
CRC11595_1
FC815548.1
CGC00316_1
FC817457.1
ACC25286_1
CJC02112_1
FC811876.1
HC02569
FC811386.1
FC816286.1
SRC00226_1
CR10348
FD517007.1
FC816911.1
SS02093
HCC00797_1
PT00595
JK315686.1
FC810176.1
CRC00028_1
CBC06580_1
GW412242.1
PP01285
SRC00194_1
GR977388.1
BI502579.1
Dviv_isotig24858
CR02869
PPC00125_1
CBC00989_1
FD515404.1
FC816908.1
Acan_isotig10426
FC815861.1
FD514367.1
Tcol_isotig18024
ES672097.1
PT00704
CBC03689_1
PT01069
CR11578
PT00022
CRC03410_1
CRC08109_1
FC810461.1
FD516141.1
FJ756440.1
FC817567.1
CBC02304_1
PTC00372_1
PP00405
TDC02240_1
FC817455.1
CSC00438_2
CR07534
FC814919.1
CJC01318_1
Oden_isotig17927
FC810837.1
FC816965.1
EX502590.1
CJC00205_1
AE04219
PT04169
ZPC00009_1
BMC07361_1
EX539387.1
FC811871.1
Oden_isotig11100
FC817459.1
PPC05464_1
CSC00438_1
Oden_isotig11099
GR978128.1
GW410835.1
FC809774.1
FD515071.1
Tcir_isotig20642
PTC00524_1
GW410561.1
SR00013
Oden_isotig07361
ZP00072
CJC13482_1
AYC01389_2
SSC02823_1
FC816158.1
EX502462.1
FC809611.1
FC817005.1
SR01083
EX540908.1
ES672512.1
PSC03041_1
AY672704.1
PPC00246_1
CR10254
PPC00958_1
CGC00112_1
SC00110
FC543617.1
EY459711.1
FD517157.1
PTC03627_1
Associated_feature (18)
Experimental_infoRNAi_result (17)
Expr_pattern (12)
Drives_constructWBCnstr00002373
WBCnstr00010076
WBCnstr00022452
WBCnstr00037658
Construct_productWBCnstr00010076
WBCnstr00022452
WBCnstr00037658
AntibodyWBAntibody00000301
Microarray_results (20)
Expression_cluster (284)
Interaction (49)
WBProcessWBbiopr:00000134
Map_infoMapVPosition18.5005Error0.138896
PositivePositive_cloneY39B6AInferred_automaticallyFrom sequence, transcript, pseudogene data
Y39B6B
Mapping_dataMulti_point4527
5346
Pseudo_map_position
Reference (31)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene