WormBase Tree Display for Gene: WBGene00012683
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| WBGene00012683 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asp-17 | Person_evidence | WBPerson261 | |||||
| Sequence_name | Y39B6A.24 | ||||||||
| Molecular_name | Y39B6A.24 | ||||||||
| Y39B6A.24.1 | |||||||||
| CE29865 | |||||||||
| Other_name | CELE_Y39B6A.24 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | asp-17 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (55) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Is an ortholog of several human genes including CTSE (cathepsin E); PGA3 (pepsinogen A3); and PGA5 (pepsinogen A5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.24 | |||||||
| Corresponding_transcript | Y39B6A.24.1 | ||||||||
| Other_sequence | ES672469.1 | ||||||||
| EX555072.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070068 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020384 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076780 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056178 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13759 | ||||||||
| Expr1012892 | |||||||||
| Expr1159682 | |||||||||
| Expr2009463 | |||||||||
| Expr2027700 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (291) | |||||||||
| Interaction | WBInteraction000524304 | ||||||||
| Map_info | Map | V | Position | 18.4979 | |||||
| Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030811 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059347 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00065012 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
