WormBase Tree Display for Gene: WBGene00000215
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WBGene00000215 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T18H9 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | asp-2 | Person_evidence | WBPerson184 | |||||
Sequence_name | T18H9.2 | ||||||||
Molecular_name | T18H9.2 | ||||||||
T18H9.2.1 | |||||||||
CE33321 | |||||||||
Other_name | CELE_T18H9.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | asp-2 | ||||||||
DB_info | Database | AceView | gene | 5J683 | |||||
WormQTL | gene | WBGene00000215 | |||||||
WormFlux | gene | WBGene00000215 | |||||||
NDB | locus_tag | CELE_T18H9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000215|UniProtKB=Q86NE0 | |||||||
family | PTHR47966 | ||||||||
NCBI | gene | 34700645 | |||||||
RefSeq | protein | NM_182329.5 | |||||||
TrEMBL | UniProtAcc | Q86NE0 | |||||||
UniProt_GCRP | UniProtAcc | Q86NE0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 21 Sep 2017 14:34:34 | WBPerson4025 | Event | Split_into | WBGene00271820 | ||||
Split_into | WBGene00271820 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | asp | ||||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00083479 | ||||||||
00083480 | |||||||||
00083481 | |||||||||
00083482 | |||||||||
00083483 | |||||||||
00083484 | |||||||||
00083485 | |||||||||
00107038 | |||||||||
00107039 | |||||||||
Ortholog (54) | |||||||||
Paralog (17) | |||||||||
Structured_description | Concise_description | asp-2 encodes aspartic protease. | Paper_evidence | WBPaper00004299 | |||||
Curator_confirmed | WBPerson480 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T18H9.2 | |||||||
Corresponding_CDS_history | T18H9.2:wp88 | ||||||||
T18H9.2:wp93 | |||||||||
T18H9.2a:wp261 | |||||||||
Corresponding_transcript | T18H9.2.1 | ||||||||
Other_sequence (482) | |||||||||
Associated_feature | WBsf647057 | ||||||||
WBsf1000829 | |||||||||
WBsf1000830 | |||||||||
WBsf1020137 | |||||||||
WBsf1020138 | |||||||||
WBsf232226 | |||||||||
WBsf232227 | |||||||||
Experimental_info | RNAi_result | WBRNAi00022716 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076681 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089159 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022717 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053474 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018807 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012909 | ||||||||
Expr1030132 | |||||||||
Expr1157039 | |||||||||
Expr2009466 | |||||||||
Expr2027704 | |||||||||
Drives_construct | WBCnstr00037657 | ||||||||
Construct_product | WBCnstr00037657 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (233) | |||||||||
Interaction (157) | |||||||||
Map_info | Map | V | Position | 1.95033 | Error | 0.000177 | |||
Positive | Positive_clone | T18H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark | Sequence connection from [Freedman J] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |