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WormBase Tree Display for Gene: WBGene00192922

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Name Class

WBGene00192922SMapS_parentSequenceCbre_Contig63
IdentityVersion1
NameSequence_nameCBN30957
Molecular_nameCBN30957
CBN30957.1
CN33839
Public_nameCBN30957
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.10825From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0.156235From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.302844From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
1.15126From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
RNASeq.brenneri.WBls:0000002.control_median
WBls:00000040.396719From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.793437From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240.143086From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0.197809From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0.438271From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0.438682From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0.978585From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380.239492From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0.239576From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.239659From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410.010112From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.012813From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
0.020378From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.026165From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.039267From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0.04586From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0.1209From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
0.169302From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
RNASeq.brenneri.WBls:0000041.control_median
WBls:00001010.104954From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00228783
00228784
00228785
OrthologWBGene00000399Caenorhabditis elegansFrom_analysisTreeFam
WBGene00035878Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00055323Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00090418Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00131439Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4311Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16063Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6093Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1839Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8166Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15521Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5903Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8218Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11488Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24046Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4946Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00202.g6893Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_14976.g24874Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_20096.g26384Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cdh-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g8674Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17997Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00250.g7959Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21241Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010871Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08556Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7362Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30290100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00019994Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIII_pilon.g7183Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIII_pilon.g7185Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Is an ortholog of C. elegans cdh-1 and cdh-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN30957
Corresponding_transcriptCBN30957.1
Experimental_infoMicroarray_resultsGPL14142_CBN30957_1627-1686_0.950_1_A
MethodGene