WormBase Tree Display for Gene: WBGene00141087

WBGene00141087 SMap: S_parent: Sequence: Cbre_Contig143
  Identity: Version: 2
    Name: CGC_name: Cbn-egl-27 From_analysis: Inferred_from_orthology
      Sequence_name: CBN02362
      Molecular_name: CBN02362
        CBN02362.1
        CN27147
      Public_name: Cbn-egl-27
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-egl-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: egl
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        26.362 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        52.7241 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        22.2677 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        27.8331 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        32.4994 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        37.9705 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        38.5491 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 10.0683 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        10.4215 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        10.7747 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 10.0854 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        11.7329 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00204013
      00204014
      00204015
    Ortholog: WBGene00001194 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032330 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00054184 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121480 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00177999 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g7079 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2259 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8666 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1223 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17443 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3993 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g12597 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20691 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8457 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00589.g12545 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-egl-27 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12091 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00831.g15893 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23829 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14409 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5334 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20269100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00097804 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00228618 Brugia malayi From_analysis: WormBase-Compara
      chrII_pilon.g4874 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247562 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00293517 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00151181 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00154461 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00192873 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable chromatin binding activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans egl-27. In C. elegans, egl-27 is involved in several processes, including egg-laying behavior; hemidesmosome assembly; and nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN02362
    Corresponding_CDS_history: CBN02362:np197
    Corresponding_transcript: CBN02362.1
    Other_sequence: Dviv_isotig29307
      PPC13312_1
      ASC06090_1
      Oden_isotig22916
      JI164933.1
      ACC27472_1
      EX828249.1
      AS09242
      CRC00467_1
  Experimental_info: Microarray_results: GPL14142_CBN02362_1063-1122_0.565_488_B
      GPL14142_CBN02362_1174-1233_0.799_114_A
      GPL14142_CBN02362_1559-1618_0.845_58_C
      GPL14142_CBN29327_783-842_0.952_1_A
  Method: Gene