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WormBase Tree Display for Gene: WBGene00032330

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Name Class

WBGene00032330SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-egl-27From_analysisInferred_from_orthology
Sequence_nameCBG11165
Molecular_nameCBG11165
CBG11165.1
CBP39790
Other_nameCBG_11165Accession_evidenceNDBHE601002
Public_nameCbr-egl-27
DB_infoDatabaseNDBlocus_tagCBG_11165
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-egl-27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classegl
RNASeq_FPKMWBls:000000235.9668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
43.4362From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
48.9334From_analysisRNASeq.briggsae.WBls:0000002.control_mean
67.3971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
48.5701From_analysisRNASeq.briggsae.WBls:0000002.control_median
50.126From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003120.22From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
141.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
98.6435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
107.846From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
116.095From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004102.534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
102.729From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
102.923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
101.471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
106.134From_analysisRNASeq.briggsae.WBls:0000004.control_mean
111.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
111.946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002722.956From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.0276From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.7942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.3325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
29.208From_analysisRNASeq.briggsae.WBls:0000027.control_mean
32.3526From_analysisRNASeq.briggsae.WBls:0000027.control_median
41.7493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003555.8479From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.1092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
31.3268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
35.1762From_analysisRNASeq.briggsae.WBls:0000038.control_mean
37.0408From_analysisRNASeq.briggsae.WBls:0000038.control_median
42.7548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
52.5139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004124.7273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
45.1319From_analysisRNASeq.briggsae.WBls:0000041.control_mean
49.8003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
51.0206From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
53.7591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
24.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
32.8801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
39.5713From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.3402From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006321.5698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.0368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
24.0975From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.2877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
28.4046From_analysisRNASeq.briggsae.WBls:0000063.control_mean
46.0311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
25.1926From_analysisRNASeq.briggsae.WBls:0000063.control_median
29.2971From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.7597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010143.4362From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.67From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
43.6152From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.6737From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135747
00135748
00135749
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to enable chromatin binding activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans egl-27. In C. elegans, egl-27 is involved in several processes, including egg-laying behavior; hemidesmosome assembly; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11165
Corresponding_CDS_historyCBG11165:bp194
CBG11165:bp255
Corresponding_transcriptCBG11165.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1069192
Microarray_resultsGPL8303_CB6_WBGene00032330_A
GPL8303_CB6_WBGene00032330_B
GPL14143_CBG11165_1306-1365_0.651_304_B
GPL14143_CBG11165_1376-1435_0.759_95_A
GPL14143_CBG11165_1765-1824_0.782_46_C
MethodGene