WormBase Tree Display for Gene: WBGene00120288

WBGene00120288 SMap: S_parent: Sequence: Cjap.Contig18142
  Identity: Version: 2
    Name: CGC_name: Cjp-lim-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA01084
      Molecular_name: CJA01084
        CJA01084.1
        JA52667
      Public_name: Cjp-lim-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lim-4
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lim
    RNASeq_FPKM (5)
    GO_annotation: 00187446
    Ortholog: WBGene00002987 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034847 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00051912 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098361 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00227603 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2483 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3313 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12595 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10413 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g459 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g23296 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g359 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20491 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26580 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22445 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00457.g11076 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-lim-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18236 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00003.g236 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00761 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024170 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13527 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g1562 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0264100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18830 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238705 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00203796 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00255929 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292218 Trichuris muris From_analysis: WormBase-Compara
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-4. In C. elegans, lim-4 is involved in several processes, including cell differentiation; positive regulation of transcription by RNA polymerase II; and serotonin biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA01084
    Corresponding_transcript: CJA01084.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1072075
    Microarray_results: GPL14145_CJA01084_528-587_0.882_11_C
      GPL14145_CJA01084_637-696_0.905_7_B
      GPL14145_CJA01084_784-843_0.940_2_A
  Method: Gene