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WormBase Tree Display for Gene: WBGene00099803

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Name Class

WBGene00099803SMapS_parentSequencePPA_ChrX
IdentityVersion2
NameCGC_namePpa-hpo-15From_analysisInferred_from_orthology
Sequence_namePPA10249
Molecular_namePPA10249
PPA10249.1
PP67640
Other_nameGENEPREDICTION_SNAP300000066786
UMM-S2845-2.20Person_evidenceWBPerson606
Public_namePpa-hpo-15
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-hpo-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.04517From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
6.13551From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00177936
OrthologWBGene00016061Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00030975Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058928Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00150575Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00134567Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00191299Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g1401Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3859Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8894Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15827Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14167Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17996Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6532Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8256Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8426Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24640Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_07789.g21110Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-hpo-15Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16176Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00402.g10810Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12035Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017749Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00821Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05490Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20147Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50195300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14256Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00256841Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans hpo-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA10249
Corresponding_transcriptPPA10249.1
Other_sequence (11)
Experimental_infoMicroarray_resultsGPL14372_Probes_74630
GPL14372_Probes_74631
GPL14372_Probes_74633
GPL14372_Probes_74634
MethodGene