Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00085880

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00085880SMapS_parentSequenceCrem_Contig83
IdentityVersion1
NameSequence_nameCRE19306
Molecular_nameCRE19306
CRE19306.1
RP33663
Public_nameCRE19306
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:00000240.1199From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
0.318614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
0.333805From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
0From_analysis (50)
WBls:00000270From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
RNASeq.remanei.WBls:0000027.control_mean
RNASeq.remanei.WBls:0000027.control_median
WBls:00000380From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_mean
RNASeq.remanei.WBls:0000038.control_median
WBls:00000410.017438From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.078563From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
13.2778From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
14.0454From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
14.7334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
6.67818From_analysisRNASeq.remanei.WBls:0000041.control_median
7.02543From_analysisRNASeq.remanei.WBls:0000041.control_mean
WBls:00000630From_analysis (12)
WBls:00001011.62125From_analysisRNASeq.remanei.total_over_all_stages.control_mean
0From_analysisRNASeq.remanei.total_over_all_stages.control_median
OrthologWBGene00017877Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020307Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00020308Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020309Caenorhabditis elegansFrom_analysisTreeFam
WBGene00032072Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00032074Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00149222Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00113240Pristionchus pacificusFrom_analysisOMA
WBGene00229122Brugia malayiFrom_analysisWormBase-Compara
WBGene00229123Brugia malayiFrom_analysisWormBase-Compara
WBGene00248455Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276626Pristionchus pacificusFrom_analysisWormBase-Compara
CSP21.g10307Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g14121Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3073Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3074Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3075Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11875Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP32.g6790Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP40.g17915Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g17916Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g17920Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_I.g1642Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g1645Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g1646Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14878Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15234Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15235Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00432.g11280Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01146.g18756Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07518Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_12357Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000305Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05802Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16373Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g3206Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g3219Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g3220Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291960Trichuris murisFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Fukutin-related. Is an ortholog of C. elegans T07D3.4; T07D3.6; and F28A10.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE19306
Corresponding_transcriptCRE19306.1
MethodGene