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WormBase Tree Display for Gene: WBGene00052466

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Name Class

WBGene00052466SMapS_parentSequenceCrem_Contig5
IdentityVersion4
NameSequence_nameCRE27381
Molecular_nameCRE27381
CRE27381.1
RP23676
Other_namecr01.sctg1.wum.342
Public_nameCRE27381
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27381
Other_namecr01.sctg1.wum.342
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-his-11.2
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000410.7284From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
5.8576From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
8.293From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (24)
WBls:000002714.5314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.09586From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.5392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
8.47396From_analysisRNASeq.remanei.WBls:0000027.control_median
9.1438From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.40872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.43332From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.28898From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.57117From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.9912From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.039415From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.061417From_analysisRNASeq.remanei.WBls:0000041.control_median
0.083418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.090483From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.19574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.224322From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630From_analysis (12)
WBls:00001010.019708From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.36221From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147733
00147734
00147735
00147736
OrthologWBGene00001878Caenorhabditis elegansFrom_analysisOMA
WBGene00001885Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00001908Caenorhabditis elegansFrom_analysisOMA
WBGene00001915Caenorhabditis elegansFrom_analysisOMA
WBGene00001928Caenorhabditis elegansFrom_analysisOMA
WBGene00032089Caenorhabditis briggsaeFrom_analysisOMA
WBGene00038550Caenorhabditis briggsaeFrom_analysisOMA
WBGene00041801Caenorhabditis briggsaeFrom_analysisOMA
WBGene00164007Caenorhabditis brenneriFrom_analysisOMA
WBGene00213692Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00214753Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00219199Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00211534Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00219079Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00142164Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00139223Caenorhabditis brenneriFrom_analysisOMA
WBGene00141387Caenorhabditis brenneriFrom_analysisOMA
WBGene00115915Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00155506Caenorhabditis brenneriFrom_analysisOMA
WBGene00138989Caenorhabditis brenneriFrom_analysisOMA
WBGene00212957Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00239923Onchocerca volvulusFrom_analysisWormBase-Compara
GCK72_018864Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g10642Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g19836Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23095Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00257118Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257583Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257754Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260310Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261392Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261603Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286204Trichuris murisFrom_analysisWormBase-Compara
WBGene00287609Trichuris murisFrom_analysisWormBase-Compara
WBGene00288397Trichuris murisFrom_analysisWormBase-Compara
WBGene00291541Trichuris murisFrom_analysisWormBase-Compara
WBGene00292965Trichuris murisFrom_analysisWormBase-Compara
WBGene00294253Trichuris murisFrom_analysisWormBase-Compara
WBGene00295041Trichuris murisFrom_analysisWormBase-Compara
WBGene00295045Trichuris murisFrom_analysisWormBase-Compara
WBGene00295049Trichuris murisFrom_analysisWormBase-Compara
WBGene00295067Trichuris murisFrom_analysisWormBase-Compara
WBGene00295072Trichuris murisFrom_analysisWormBase-Compara
WBGene00295901Trichuris murisFrom_analysisWormBase-Compara
WBGene00296694Trichuris murisFrom_analysisWormBase-Compara
WBGene00296941Trichuris murisFrom_analysisWormBase-Compara
WBGene00296942Trichuris murisFrom_analysisWormBase-Compara
WBGene00297838Trichuris murisFrom_analysisWormBase-Compara
WBGene00298960Trichuris murisFrom_analysisWormBase-Compara
WBGene00298961Trichuris murisFrom_analysisWormBase-Compara
WBGene00299711Trichuris murisFrom_analysisWormBase-Compara
WBGene00300523Trichuris murisFrom_analysisWormBase-Compara
WBGene00300942Trichuris murisFrom_analysisWormBase-Compara
Paralog (13)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-4 and his-54.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27381
Corresponding_transcriptCRE27381.1
Other_sequence (34)
Experimental_infoExpression_clusterWBPaper00054996:activated_sperm_CRE
Remark[190208 pad] The CGC name Cre-his-11.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene