WormBase Tree Display for Gene: WBGene00018769

WBGene00018769 SMap: S_parent: Sequence: F53G2
  Identity: Version: 3
    Name: CGC_name: mnat-1 Person_evidence: WBPerson1711
      Sequence_name: F53G2.7
      Molecular_name: F53G2.7
        F53G2.7.1
        CE31957
      Other_name: CELE_F53G2.7 Accession_evidence: NDB BX284602
      Public_name: mnat-1
    DB_info: Database (10)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jun 2005 10:01:00 WBPerson2970 Name_change: CGC_name: mnat-1
        3 06 Mar 2018 14:46:28 WBPerson4025 Event: Split_into: WBGene00302998
      Split_into: WBGene00302998
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mnat
    Allele (216)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP2070
      CEOP5610
    Ortholog: WBGene00039424 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155228 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00086321 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00176122 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224581 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g5338 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16547 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20231 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16977 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25587 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4836 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7555 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g701 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g241 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00307.g8921 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mnat-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold517.g2717 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_09913 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13575 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g429 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20029600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3689 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247457 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262987 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292187 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002868 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0024956 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041010-203 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:7181 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:106207 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:628874 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable cyclin-dependent protein serine/threonine kinase activator activity; kinase activity; and metal ion binding activity. Predicted to be involved in DNA repair and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIH holo complex. Is an ortholog of human MNAT1 (MNAT1 component of CDK activating kinase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F53G2.7
    Corresponding_CDS_history: F53G2.7:wp86
      F53G2.7a:wp264
      F53G2.7b:wp264
      F53G2.7c:wp264
    Corresponding_transcript: F53G2.7.1
    Other_sequence (13)
    Associated_feature: WBsf649931
      WBsf986955
      WBsf1011716
      WBsf222769
  Experimental_info: RNAi_result: WBRNAi00032716 Inferred_automatically: RNAi_primary
      WBRNAi00076468 Inferred_automatically: RNAi_primary
      WBRNAi00048180 Inferred_automatically: RNAi_primary
      WBRNAi00007353 Inferred_automatically: RNAi_primary
      WBRNAi00094760 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015743
      Expr1038088
      Expr1151995
      Expr2013629
      Expr2031863
    Drives_construct: WBCnstr00026283
    Construct_product: WBCnstr00026283
    Microarray_results (21)
    Expression_cluster (118)
    Interaction (118)
  Map_info: Map: II Position: -12.8215 Error: 0.076773
    Positive: Positive_clone: F53G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027315
    WBPaper00029038
    WBPaper00038491
    WBPaper00055090
    WBPaper00062203
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene