WormBase Tree Display for Gene: WBGene00302998
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| WBGene00302998 | SMap | S_parent | Sequence | F53G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F53G2.12 | |||||||
| Molecular_name | F53G2.12a | ||||||||
| F53G2.12a.1 | |||||||||
| CE52646 | |||||||||
| F53G2.12b | |||||||||
| CE52616 | |||||||||
| F53G2.12c | |||||||||
| CE52632 | |||||||||
| F53G2.12b.1 | |||||||||
| F53G2.12c.1 | |||||||||
| Other_name | CELE_F53G2.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F53G2.12 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_F53G2.12 | |||||
| Panther | gene | CAEEL|WormBase=WBGene00302998|UniProtKB=A0A2R8F5A8 | |||||||
| family | PTHR13166 | ||||||||
| NCBI | gene | 36805016 | |||||||
| RefSeq | protein | NM_001364059.4 | |||||||
| NM_001361848.1 | |||||||||
| NM_001381351.1 | |||||||||
| TrEMBL | UniProtAcc | A0A2R8F5A8 | |||||||
| A0A2K5ATR1 | |||||||||
| A0A2K5ATS8 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2R8F5A8 | |||||||
| OMIM | gene | 613311 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 06 Mar 2018 14:46:29 | WBPerson4025 | Event | Split_from | WBGene00018769 | ||
| Split_from | WBGene00018769 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (94) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003082 | ||||||||
| 00003083 | |||||||||
| 00003084 | |||||||||
| Contained_in_operon | CEOP5610 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in iron-sulfur cluster assembly. Predicted to be located in mitochondrion. Predicted to be part of L-cysteine desulfurase complex. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 19. Is an ortholog of human LYRM4 (LYR motif containing 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21365) | ||||
| Molecular_info | Corresponding_CDS | F53G2.12a | |||||||
| F53G2.12b | |||||||||
| F53G2.12c | |||||||||
| Corresponding_transcript | F53G2.12a.1 | ||||||||
| F53G2.12b.1 | |||||||||
| F53G2.12c.1 | |||||||||
| Other_sequence (28) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032716 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076468 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007353 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094760 | Inferred_automatically | RNAi_primary | |||||||
| Microarray_results | SMD_F53G2.7 | ||||||||
| GPL14144_F53G2.7_164-223_0.895_5_C | |||||||||
| Expression_cluster | WBPaper00060886:spr-5(by101)_downregulated | ||||||||
| WBPaper00062159:hda-2(ok1479)_downregulated | |||||||||
| WBPaper00064071:NHR-49_interacting | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| Map_info | Map | II | |||||||
| Positive | Positive_clone | F53G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -12.8148 | |||||||
| Reference | WBPaper00061547 | ||||||||
| Method | Gene |
