WormBase Tree Display for Gene: WBGene00017240

WBGene00017240 SMap: S_parent: Sequence: F08B6
  Identity: Version: 2
    Name: CGC_name: calu-2 Person_evidence: WBPerson260
      Sequence_name: F08B6.3
      Molecular_name: F08B6.3
        F08B6.3.1
        CE48191
      Other_name: CELE_F08B6.3 Accession_evidence: NDB BX284601
      Public_name: calu-2
    DB_info: Database: AceView gene 1H336
        WormQTL gene WBGene00017240
        WormFlux gene WBGene00017240
        NDB locus_tag CELE_F08B6.3
        Panther gene CAEEL|WormBase=WBGene00017240|UniProtKB=Q9TYS8
          family PTHR10827
        NCBI gene 184174
        RefSeq protein NM_059535.4
        TrEMBL UniProtAcc Q9TYS8
        UniProt_GCRP UniProtAcc Q9TYS8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Mar 2012 14:04:45 WBPerson2970 Name_change: CGC_name: calu-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: calu
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00097597
      00097598
      00122669
    Ortholog: WBGene00060603 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00026800 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00121291 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190613 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00145798 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00223446 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10345 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g2018 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3786 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11171 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8655 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8069 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11004 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8029 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19838 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01766.g16723 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-calu-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17062 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00236.g7664 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18688 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001055 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11762 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9431 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10297000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1236 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237867 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00283751 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259913 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292304 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296343 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0031673 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050706-62 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            PhylomeDB
      HGNC:9935 Homo sapiens From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            PhylomeDB
      MGI:1349765 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            PhylomeDB
      RGD:3548 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            PhylomeDB
    Paralog: WBGene00016965 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019760 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00023408 Caenorhabditis elegans From_analysis: Panther
      WBGene00023407 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be located in endoplasmic reticulum. Expressed in body wall musculature; neurons; and pharynx. Is an ortholog of human RCN2 (reticulocalbin 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F08B6.3
    Corresponding_CDS_history: F08B6.3:wp102
      F08B6.3:wp236
    Corresponding_transcript: F08B6.3.1
    Other_sequence (20)
    Associated_feature: WBsf649257
      WBsf219633
      WBsf219634
  Experimental_info: RNAi_result: WBRNAi00030636 Inferred_automatically: RNAi_primary
      WBRNAi00043975 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7970
      Expr1015939
      Expr1037402
      Expr1147949
      Expr2009711
      Expr2027950
    Drives_construct: WBCnstr00013034
      WBCnstr00027461
    Construct_product: WBCnstr00027461
    Microarray_results (16)
    Expression_cluster (58)
    Interaction: WBInteraction000329339
      WBInteraction000367633
      WBInteraction000376858
      WBInteraction000421886
      WBInteraction000521524
      WBInteraction000573845
  Map_info: Map: I Position: 1.31141
    Positive: Positive_clone: F08B6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (3)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene