WormBase Tree Display for Gene: WBGene00013301

WBGene00013301 SMap: S_parent: Sequence: Y57G11C
  Identity: Version: 1
    Name: Sequence_name: Y57G11C.3
      Molecular_name: Y57G11C.3a
        Y57G11C.3a.1
        CE24473
        Y57G11C.3b
        CE14930
        Y57G11C.3b.1
      Other_name: CELE_Y57G11C.3 Accession_evidence: NDB BX284604
      Public_name: Y57G11C.3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Contained_in_operon: CEOP4667
    Ortholog: WBGene00040270 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00074673 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00071686 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162987 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120051 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00234278 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8748 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6687 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12556 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7545 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3440 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15830 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g13698 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g22225 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00384.g10090 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y57G11C.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21251 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00526.g12462 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_24036 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_012879 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01233 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11891 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40183400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12525 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239439 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304320 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00257336 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293191 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000718 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000003480 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000005317 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000001206 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0030239 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-040822-9 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:8903 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1913421 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1307001 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: Y57G11C.3 encodes the C. elegans 6-phosphogluconolactonase (6PGL) ortholog; by homology, the product of Y57G11C.3 is predicted to catalyze the second reaction of the oxidative branch of the pentose-phosphate pathway in which 6-phosphogluconolactone is converted to 6-phosphogluconate. Curator_confirmed: WBPerson1843
          Date_last_updated: 21 Jan 2009 00:00:00
      Automated_description: Predicted to enable 6-phosphogluconolactonase activity. Predicted to be involved in pentose-phosphate shunt, oxidative branch. Located in nucleus. Expressed in germ cell. Is an ortholog of human PGLS (6-phosphogluconolactonase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS (2)
    Corresponding_transcript: Y57G11C.3a.1
      Y57G11C.3b.1
    Other_sequence (24)
    Associated_feature: WBsf646565
      WBsf660937
      WBsf229526
      WBsf229527
  Experimental_info: RNAi_result (21)
    Expr_pattern: Expr9437
      Expr15057
      Expr1014359
      Expr1035931
      Expr1161110
      Expr2008064
      Expr2026303
    Drives_construct: WBCnstr00029702
    Construct_product: WBCnstr00014002
      WBCnstr00029702
    Microarray_results (20)
    Expression_cluster (68)
    Interaction (68)
  Map_info: Positive: Positive_clone: Y57G11C Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 12.4444
  Reference: WBPaper00031648
    WBPaper00038444
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00059605
    WBPaper00063976
  Method: Gene