WormBase Tree Display for Gene: WBGene00008749

WBGene00008749 SMap: S_parent: Sequence: F13E6
  Identity: Version: 2
    Name: CGC_name: plpp-1.3 Person_evidence: WBPerson580
      Sequence_name: F13E6.5
      Molecular_name: F13E6.5
        F13E6.5.1
        CE37502
      Other_name: CELE_F13E6.5 Accession_evidence: NDB BX284606
      Public_name: plpp-1.3
    DB_info: Database: AceView gene XL315
        WormQTL gene WBGene00008749
        WormFlux gene WBGene00008749
        NDB locus_tag CELE_F13E6.5
        Panther gene CAEEL|WormBase=WBGene00008749|UniProtKB=Q19403
          family PTHR10165
        NCBI gene 181268
        RefSeq protein NM_077389.4
        TrEMBL UniProtAcc Q19403
        UniProt_GCRP UniProtAcc Q19403
    Species: Caenorhabditis elegans
    History: Version_change (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: plpp
    Allele (42)
    Strain: WBStrain00036553
    RNASeq_FPKM (74)
    GO_annotation: 00064622
      00064623
      00064624
      00064625
      00064626
      00064627
      00116604
    Ortholog: WBGene00027170 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00058423 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127653 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162338 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00161350 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00182100 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00084804 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00054090 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00135568 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00118185 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00234605 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g9250 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3112 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5506 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15975 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25006 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g25481 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2075 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1854 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8507 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3864 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00149.g5647 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g23447 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13792 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00063.g3028 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01277 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023623 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12269 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g2538 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0075400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19938 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246946 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00264622 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000002692 Saccharomyces cerevisiae From_analysis: OMA
            OrthoInspector
            Panther
    Paralog: WBGene00011524 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018756 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020895 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F13E6.5
    Corresponding_CDS_history: F13E6.5:wp132
    Corresponding_transcript: F13E6.5.1
    Other_sequence (22)
    Associated_feature: WBsf236307
  Experimental_info: RNAi_result: WBRNAi00044516 Inferred_automatically: RNAi_primary
      WBRNAi00000461 Inferred_automatically: RNAi_primary
      WBRNAi00013227 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026295
      Expr1033818
      Expr1148465
      Expr2002516
      Expr2020734
    Drives_construct: WBCnstr00032721
    Construct_product: WBCnstr00032721
    Microarray_results (19)
    Expression_cluster (90)
    Interaction: WBInteraction000032075
      WBInteraction000369463
      WBInteraction000432657
      WBInteraction000441689
      WBInteraction000456151
      WBInteraction000461648
      WBInteraction000466785
      WBInteraction000472338
      WBInteraction000472339
  Map_info: Map: X Position: 2.37373
    Positive: Positive_clone: F13E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene