WormBase Tree Display for Gene: WBGene00007536

WBGene00007536 SMap: S_parent: Sequence: C12D8
  Identity: Version: 2
    Name: CGC_name: daf-36 Paper_evidence: WBPaper00027186
          Person_evidence: WBPerson521
      Sequence_name: C12D8.5
      Molecular_name: C12D8.5
        C12D8.5.1
        CE34156
      Other_name: CELE_C12D8.5 Accession_evidence: NDB BX284605
      Public_name: daf-36
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: daf
    Allele (38)
    Strain: WBStrain00000022
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog: WBGene00059087 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      WBGene00031117 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00066943 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00117302 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00137207 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00231956 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3395 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13141 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g2722 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12047 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8147 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10642 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19862 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25435 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25446 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_00359.g9709 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-daf-36 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_07745 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017584 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12193 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50283420 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15456 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248492 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261563 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0287185 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-356 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: daf-36 encodes a protein homologous to the catalytic subunit of Rieske-like oxygenases; DAF-36 functions in a hormone biosynthetic pathway producing a ligand for the DAF-12 nuclear receptor that regulates the developmental decision between reproductive growth and dauer formation; a daf-36::gfp reporter fusion is expressed in the intestine, the head mesodermal cell, two unidentified head neurons (not XXXR/L) and, in dauers, the lateral seam cells; DAF-36 localizes to the cytoplasm in the intestine and to a cytosolic meshwork in dauer seam cells. Paper_evidence: WBPaper00027186
          Curator_confirmed: WBPerson1843
          Date_last_updated: 29 Nov 2007 00:00:00
      Automated_description: Predicted to enable oxidoreductase activity. Predicted to be involved in cholesterol metabolic process. Located in cytoplasm. Expressed in head mesodermal cell; intestine; neurons; and seam cell. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C12D8.5
    Corresponding_CDS_history: C12D8.5:wp102
    Corresponding_transcript: C12D8.5.1
    Other_sequence (13)
    Associated_feature: WBsf234352
  Experimental_info: RNAi_result: WBRNAi00028827 Inferred_automatically: RNAi_primary
      WBRNAi00040395 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3866
      Expr1014872
      Expr1144465
      Expr2010775
      Expr2029012
    Drives_construct: WBCnstr00033667
    Construct_product: WBCnstr00008915
      WBCnstr00008916
      WBCnstr00008917
      WBCnstr00015773
      WBCnstr00033667
    Microarray_results (18)
    Expression_cluster (171)
    Interaction (61)
  Map_info: Map: V Position: 2.37946 Error: 0.001577
    Positive: Positive_clone: C12D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (29)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene