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WormBase Tree Display for Gene: WBGene00004257

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Name Class

WBGene00004257EvidencePerson_evidenceWBPerson345
SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameCGC_namepxn-2Person_evidenceWBPerson345
Sequence_nameK09C8.5
Molecular_nameK09C8.5
K09C8.5.1
CE18882
Other_nameCELE_K09C8.5Accession_evidenceNDBBX284606
Public_namepxn-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpxn
Allele (91)
StrainWBStrain00050779
WBStrain00050789
RNASeq_FPKM (74)
GO_annotation (24)
OrthologWBGene00058376Caenorhabditis remaneiFrom_analysis (4)
WBGene00024751Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037136Caenorhabditis briggsaeFrom_analysis (4)
WBGene00147771Caenorhabditis brenneriFrom_analysis (4)
WBGene00100463Pristionchus pacificusFrom_analysis (2)
WBGene00130916Caenorhabditis japonicaFrom_analysis (3)
WBGene00227866Brugia malayiFrom_analysisWormBase-Compara
WBGene00231273Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3742Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4107Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12176Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14440Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15915Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10084Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1360Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g19663Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19940Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00158.g5874Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-pxn-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13848Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00025.g1466Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01217Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023685Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g9134Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0079700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19984Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241715Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243881Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00112475Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272734Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258032Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285492Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0011828Drosophila melanogasterFrom_analysis (9)
ZFIN:ZDB-GENE-030131-9460Danio rerioFrom_analysis (3)
HGNC:6678Homo sapiensFrom_analysis (3)
HGNC:7218Homo sapiensFrom_analysis (3)
HGNC:14966Homo sapiensFrom_analysis (9)
HGNC:3423Homo sapiensFrom_analysis (3)
HGNC:26359Homo sapiensFrom_analysis (9)
MGI:107569Mus musculusFrom_analysis (3)
MGI:97137Mus musculusFrom_analysis (3)
MGI:1916925Mus musculusFrom_analysis (9)
MGI:1923363Mus musculusFrom_analysis (3)
RGD:1310051Rattus norvegicusFrom_analysis (3)
RGD:1592081Rattus norvegicusFrom_analysis (3)
RGD:1311882Rattus norvegicusFrom_analysis (3)
RGD:1560694Rattus norvegicusFrom_analysis (9)
ParalogWBGene00004256Caenorhabditis elegansFrom_analysis (3)
WBGene00015841Caenorhabditis elegansFrom_analysis (3)
WBGene00009897Caenorhabditis elegansFrom_analysis (3)
WBGene00011530Caenorhabditis elegansFrom_analysis (3)
WBGene00019613Caenorhabditis elegansFrom_analysis (3)
WBGene00022743Caenorhabditis elegansFrom_analysis (3)
WBGene00016700Caenorhabditis elegansFrom_analysis (3)
WBGene00019970Caenorhabditis elegansFrom_analysis (3)
WBGene00008627Caenorhabditis elegansFrom_analysis (3)
WBGene00017968Caenorhabditis elegansFrom_analysis (3)
Structured_descriptionConcise_descriptionpxn-2 encodes a member of the peroxidasin family of extracellular peroxidases containing several LLRs, two of four Ig domains and a heme peroxidase catalytic domain, PXN-2 is closely related to human PXDN and PXDNL (OMIM: 605158); PXN-2 function becomes critical soon after the twofold stage of epidermal elongation in embryos; pxn-2 mutants display defects in late stages of epidermal elongation, in muscle and epidermal muscle attachments, in vulval muscle attachment and in morphology of adult pharynx; PXN-2 supports a role in basement membrane function and in neuronal development, PXN-2 acts in selective axon guidance decisions but not essential for axon growth; PXN-2 inhibits adult axon regrowth after injury; PXN-1 acts antagonistically to PXN-2; PXN-2 expressed in differentiated epidermal cell throughout embryonic, larval and adult development, in vulval muscles and a few neurons, in longitudinal striations adjacent to the body wall muscle quadrant close to endogenous basement membrane components.Curator_confirmedWBPerson12884
Date_last_updated22 Jun 2011 00:00:00
Automated_descriptionPredicted to enable peroxidase activity. Involved in several processes, including embryonic body morphogenesis; muscle attachment; and regulation of cellular component organization. Located in basement membrane. Expressed in PVQL; PVQR; hypodermis; and vulval muscle. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease 1; asthma (multiple); kidney failure (multiple); and lung disease (multiple). Is an ortholog of human PXDN (peroxidasin) and PXDNL (peroxidasin like).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (21)
Molecular_infoCorresponding_CDSK09C8.5
Corresponding_transcriptK09C8.5.1
Other_sequence (53)
Associated_featureWBsf1006871
WBsf237924
WBsf237925
Experimental_infoRNAi_result (21)
Expr_patternExpr3586
Expr9134
Expr9135
Expr1015080
Expr1032100
Expr1154107
Expr2015201
Expr2033435
Drives_constructWBCnstr00013738
WBCnstr00013739
WBCnstr00020278
WBCnstr00035606
Construct_productWBCnstr00011510
WBCnstr00013739
WBCnstr00035606
Microarray_results (18)
Expression_cluster (154)
InteractionWBInteraction000537479
WBInteraction000537481
WBInteraction000573516
Map_info (3)
Reference (17)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene