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WormBase Tree Display for Gene: WBGene00004185

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Name Class

WBGene00004185SMapS_parentSequenceR166
IdentityVersion1
NameCGC_namepro-1Person_evidenceWBPerson275
Sequence_nameR166.4
Molecular_nameR166.4
R166.4.1
CE03583
Other_nameCELE_R166.4Accession_evidenceNDBBX284602
Public_namepro-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpro
Allele (45)
StrainWBStrain00007707
RNASeq_FPKM (74)
GO_annotation (19)
Contained_in_operonCEOP2492
OrthologWBGene00053396Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026011Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00158166Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112322Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00183605Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00225703Brugia malayiFrom_analysisWormBase-Compara
CSP21.g2918Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10515Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16953Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13330Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24428Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g11981Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2952Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g178Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17354Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-pro-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8955Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00106.g4458Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23652Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005512Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02166Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_20288000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5758Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237622Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263679Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291279Trichuris murisFrom_analysisWormBase-Compara
SGD:S000005126Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoInspector
Panther
FB:FBgn0023514Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-040905-4Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
HGNC:17956Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
MGI:2158400Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1310646Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionpro-1 encodes a WD-repeat-containing protein that is orthologous to Saccharomyces cerevisiae IPI3; pro-1 activity is required for ribosome biogenesis and specifically, for efficient processing of intervening sequence 2 (ITS2) from rRNA intermediates during 26S rRNA maturation; during development, pro-1 is essential for larval growth, fertility, and normal cell division patterns; in addition, pro-1 is required cell autonomously in the somatic gonad for proper spatial and temporal regulation of germline development and proliferation; a pro-1 promoter::gfp fusion construct reveals that pro-1 is widely expressed in the embryo as well as in every major post-embryonic lineage including the somatic gonad.Paper_evidenceWBPaper00005654
WBPaper00006395
WBPaper00006484
WBPaper00028280
Curator_confirmedWBPerson1843
Date_last_updated01 Aug 2006 00:00:00
Automated_descriptionInvolved in germ cell development; gonad development; and rRNA processing. Predicted to be located in nucleoplasm. Predicted to be part of Rix1 complex and nuclear pre-replicative complex. Expressed widely. Is an ortholog of human WDR18 (WD repeat domain 18).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR166.4
Corresponding_transcriptR166.4.1
Other_sequence (37)
Associated_featureWBsf650505
WBsf989377
WBsf989378
WBsf223807
Experimental_infoRNAi_result (19)
Expr_patternExpr2932
Expr1021028
Expr1032045
Expr1155642
Expr2015103
Expr2033341
Drives_constructWBCnstr00001236
WBCnstr00011026
WBCnstr00035649
Construct_productWBCnstr00011026
WBCnstr00035649
Microarray_results (19)
Expression_cluster (107)
Interaction (79)
Map_infoPositivePositive_cloneR166Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point (3)
Pos_neg_data10741
10742
10743
10744
Interpolated_map_positionII3.07684
Reference (14)
MethodGene