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WormBase Tree Display for Gene: WBGene00001743

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Name Class

WBGene00001743SMapS_parentSequenceK06H7
IdentityVersion1
NameCGC_namegrp-1
Sequence_nameK06H7.4
Molecular_nameK06H7.4
K06H7.4.1
CE26942
Other_nameCELE_K06H7.4Accession_evidenceNDBBX284603
Public_namegrp-1
DB_infoDatabaseAceViewgene3J177
WormQTLgeneWBGene00001743
WormFluxgeneWBGene00001743
NDBlocus_tagCELE_K06H7.4
PanthergeneCAEEL|WormBase=WBGene00001743|UniProtKB=P34512
familyPTHR10663
NCBIgene176140
RefSeqproteinNM_066363.4
SwissProtUniProtAccP34512
TREEFAMTREEFAM_IDTF352091
UniProt_GCRPUniProtAccP34512
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgrp
Allele (44)
StrainWBStrain00001246
WBStrain00022154
RNASeq_FPKM (74)
GO_annotation00042733
00042734
00042735
00109354
00109355
Contained_in_operonCEOP3480
OrthologWBGene00061837Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00041411Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00152003Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00107441Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00213119Caenorhabditis japonicaFrom_analysisInparanoid_8
CBOVI.g5360Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11854Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5624Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8508Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16735Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10937Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14861Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18903Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27782Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28897Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g332Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01425.g16402Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g11774Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14502Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_21421Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008281Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03665Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30053200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8303Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133524Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00292920Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0086779Drosophila melanogasterFrom_analysisOrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030131-657Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030131-4311Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-090624-6Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-100921-55Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-120612-1Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-080219-45Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:9504Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:9502Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
HGNC:9501Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
HGNC:9505Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
MGI:1334257Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
MGI:1334255Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
MGI:1335107Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
MGI:2441702Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
RGD:620397Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
RGD:620398Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
RGD:620399Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
RGD:1564842Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ParalogWBGene00007703Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012386Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013223Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019726Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of ARF protein signal transduction. Located in midbody and nucleus. Expressed in somatic cell. Is an ortholog of human CYTH4 (cytohesin 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK06H7.4
Corresponding_transcriptK06H7.4.1
Other_sequence (15)
Associated_feature (4)
Experimental_infoRNAi_resultWBRNAi00008191Inferred_automaticallyRNAi_primary
WBRNAi00005158Inferred_automaticallyRNAi_primary
WBRNAi00050072Inferred_automaticallyRNAi_primary
WBRNAi00016686Inferred_automaticallyRNAi_primary
WBRNAi00002348Inferred_automaticallyRNAi_primary
WBRNAi00098434Inferred_automaticallyRNAi_primary
WBRNAi00030285Inferred_automaticallyRNAi_primary
WBRNAi00065626Inferred_automaticallyRNAi_primary
Expr_patternChronogram2026
Expr6338
Expr12365
Expr12366
Expr1024282
Expr1031036
Expr1153775
Expr2012277
Expr2030513
Drives_constructWBCnstr00002138
WBCnstr00002139
WBCnstr00020998
WBCnstr00036723
Construct_productWBCnstr00019482
WBCnstr00019517
WBCnstr00019522
WBCnstr00020998
WBCnstr00036723
AntibodyWBAntibody00002561
Microarray_results (21)
Expression_cluster (137)
Interaction (54)
Map_infoMapIIIPosition-0.381443Error0.001276
PositivePositive_cloneK06H7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5311
5644
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene