WormBase Tree Display for Gene: WBGene00001476

WBGene00001476 SMap: S_parent: Sequence: K08C7
  Identity: Version: 2
    Name: CGC_name: fmo-1
      Sequence_name: K08C7.2
      Molecular_name (4)
      Other_name: fmo-11 Person_evidence: WBPerson3011
        CELE_K08C7.2 Accession_evidence: NDB BX284604
      Public_name: fmo-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 20 Sep 2004 14:56:48 WBPerson1971 Name_change: CGC_name: fmo-11 -> fmo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fmo
    Allele (42)
    Strain: WBStrain00031411
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog: WBGene00059241 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073598 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00027099 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            WormBase-Compara
      WBGene00027112 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037773 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00133166 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00194411 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190713 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00111117 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00095444 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00111496 Pristionchus pacificus From_analysis: OMA
      WBGene00270566 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g8839 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g8840 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g1477 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21653 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7340 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6500 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12234 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g12235 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16318 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19411 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19418 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19423 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15681 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21148 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01260.g16099 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_01260.g16100 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_05546.g19666 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g15005 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17740 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00187.g6578 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14076 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014944 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07809 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12393 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5182 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40091900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_40092200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11643 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00095402 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101350 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281527 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266599 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000001219 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-041001-98 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-2644 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-6606 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3769 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3770 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3771 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3772 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3773 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24024 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1310002 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1100496 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1310004 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1916776 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2429497 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2681841 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:3643319 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:3643320 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:3606068 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2622 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:619761 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:628600 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:628601 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:628602 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1559819 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1559491 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1595097 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1595083 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00001477 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001478 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001480 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001479 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007254 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016728 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: fmo-1 encodes a flavin-containing monoxygenase homologous to human FMO1, FMO2, and FMO3 (OMIM:602079, mutated in trimethylaminuria). Paper_evidence: WBPaper00004637
          Curator_confirmed: WBPerson567
          Date_last_updated: 16 May 2007 00:00:00
      Automated_description: Predicted to enable monooxygenase activity. Predicted to be involved in lipid metabolic process. Predicted to be located in endoplasmic reticulum membrane. Expressed in excretory gland cell and head. Human ortholog(s) of this gene implicated in hypertension and trimethylaminuria. Is an ortholog of several human genes including FMO2 (flavin containing dimethylaniline monoxygenase 2); FMO3 (flavin containing dimethylaniline monoxygenase 3); and FMO4 (flavin containing dimethylaniline monoxygenase 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080361 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3771)
      DOID:655 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3771)
      DOID:10763 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3771)
  Molecular_info: Corresponding_CDS: K08C7.2
    Corresponding_CDS_history: K08C7.2:wp84
    Corresponding_transcript: K08C7.2.1
      K08C7.2.2
    Other_sequence (19)
    Associated_feature: WBsf646321
      WBsf997672
      WBsf1018122
      WBsf229016
      WBsf229017
      WBsf229018
  Experimental_info: RNAi_result: WBRNAi00050235 Inferred_automatically: RNAi_primary
      WBRNAi00016779 Inferred_automatically: RNAi_primary
      WBRNAi00061319 Inferred_automatically: RNAi_primary
      WBRNAi00090641 Inferred_automatically: RNAi_primary
      WBRNAi00034109 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram2018
      Expr3217
      Expr6358
      Expr6359
      Expr1015074
      Expr1030880
      Expr1153930
      Expr2011856
      Expr2030094
    Drives_construct: WBCnstr00002579
      WBCnstr00004376
      WBCnstr00011228
      WBCnstr00036922
    Construct_product: WBCnstr00036922
    Microarray_results (21)
    Expression_cluster (246)
    Interaction (14)
  Map_info: Map: IV Position: 4.64218 Error: 0.000465
    Positive: Positive_clone: K08C7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4321
        4322
        4275
    Pseudo_map_position
  Reference: WBPaper00025133
    WBPaper00038491
    WBPaper00052994
    WBPaper00055090
    WBPaper00062682
    WBPaper00064144
  Remark: Sequence connection from [Barstead RJ] [040902 ck1]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    This gene has been renamed with approval of the CGC (fmo-11->fmo-1) Person_evidence: WBPerson3011
  Method: Gene