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WormBase Tree Display for Gene: WBGene00001399

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Name Class

WBGene00001399SMapS_parentSequenceF10D2
IdentityVersion1
NameCGC_namefat-7
Sequence_nameF10D2.9
Molecular_nameF10D2.9
F10D2.9.1
CE09320
Other_nameCELE_F10D2.9Accession_evidenceNDBBX284605
Public_namefat-7
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfat
Allele (42)
StrainWBStrain00004020
WBStrain00004021
WBStrain00004022
WBStrain00008410
WBStrain00008411
RNASeq_FPKM (74)
GO_annotation (21)
OrthologWBGene00095337Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00190247Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00147451Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00127853Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00075128Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00066344Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00099607Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00092843Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00028498Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226351Brugia malayiFrom_analysisWormBase-Compara
WBGene00229376Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10832Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14155Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13480Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10980Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7676Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26678Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10128Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1065Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18537Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3381Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17604Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00256.g7977Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14106Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15603Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00015.g974Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04897Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014197Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10797Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12463Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g12464Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g12465Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g22027Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40232910Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14611Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244083Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244084Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00278883Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268087Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000003023Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
FB:FBgn0043043Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0038130Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0039754Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
PhylomeDB
FB:FBgn0039755Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
PhylomeDB
FB:FBgn0039756Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
PhylomeDB
FB:FBgn0029172Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0086687Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-031106-3Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050522-12Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:10571Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:21088Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:98239Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:98240Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1353437Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2670997Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:621177Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:621176Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1563648Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1595370Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00001397Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001398Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
Structured_description (2)
Disease_infoPotential_modelDOID:0112160Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:21088)
Molecular_info (4)
Experimental_infoRNAi_result (54)
Expr_patternChronogram631
Expr4292
Expr4571
Expr5716
Expr13449
Expr16083
Expr1021466
Expr1148206
Expr2011440
Expr2029678
Drives_constructWBCnstr00004076
WBCnstr00009389
WBCnstr00011890
WBCnstr00016671
WBCnstr00020551
WBCnstr00036971
WBCnstr00042754
Construct_productWBCnstr00011890
WBCnstr00016671
WBCnstr00020551
WBCnstr00036971
WBCnstr00038737
Microarray_results (18)
Expression_cluster (383)
Interaction (289)
WBProcessWBbiopr:00000121
Map_infoMapVPosition0.613044Error0.000716
PositivePositive_cloneF10D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4303
4307
Pseudo_map_position
Reference (130)
PictureWBPicture0000013088
WBPicture0000013096
WBPicture0000013098
Remarksequence connection from [Watts J]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene