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WormBase Tree Display for Gene: WBGene00000906

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Name Class

WBGene00000906SMapS_parentSequenceF23B2
IdentityVersion3
NameCGC_namedaf-10Person_evidenceWBPerson521
WBPerson41163
Sequence_nameF23B2.4
Molecular_nameF23B2.4
F23B2.4.1
CE40504
Other_nameosm-4
ift-122Person_evidenceWBPerson41163
CELE_F23B2.4Accession_evidenceNDBBX284604
Public_namedaf-10
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
216 Jun 2006 16:39:11WBPerson2970EventAcquires_mergeWBGene00009074
305 May 2023 12:43:53WBPerson51134Name_changeCGC_namedaf-10
Other_nameift-122
Acquires_mergeWBGene00009074
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdaf
Reference_alleleWBVar00143964
Allele (124)
Legacy_informatione1387 : defective dauer formation (daf-8 daf-2 suppressible) abnormal chemotaxis abnormal osmotic avoidance males impotent; abnormal sensory anatomy especially amphidial neurons and sheath cells cephalic neurons; octopamine deficient. ES1. ME0. NA2 (m79 p821 pka osm-4).
See daf-10.
See also e1387, p821
[C.elegansII] e1387 : defective dauer formation; abnormal chemotaxis abnormal osmotic avoidance; males impotent; abnormal sensory anatomy especially amphidial neurons and sheath cells, cephalic neurons; Dyf (FITC uptake defective); octopamine deficient. ES1. ME0. OA10: m79, p821 (pka osm-4), m534mut, mn321mut, etc. [Starich et al. 1995; DR; SP]
StrainWBStrain00030799
WBStrain00036760
WBStrain00004318
WBStrain00004878
WBStrain00006213
RNASeq_FPKM (74)
GO_annotation (20)
OrthologWBGene00063909Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00040474Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00146819Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00127909Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00151663Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00189994Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00209208Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00223793Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8145Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3299Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14486Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19253Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4035Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26711Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12348Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9102Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17031Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12737Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00336.g9399Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-daf-10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9641Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9645Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00466.g11739Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16559Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013328Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12421Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13858Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40353100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11243Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00210563Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00073285Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073869Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00241505Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00277063Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00266201Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287125Trichuris murisFrom_analysisWormBase-Compara
WBGene00296225Trichuris murisFrom_analysisWormBase-Compara
WBGene00296226Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0265102Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040426-2449Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:13556Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1932386Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1311302Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptiondaf-10 encodes a WD- and WAA-repeat containing protein that is the C. elegans ortholog of intraflagellar transport (IFT) complex A component IFT122; daf-10 activity is required for intraflagellar transport and thus for proper development of amphid and phasmid neurons, dauer development, chemotaxis, and normal lifespan; a DAF-10::GFP fusion protein undergoes both anterograde and retrograde intraflagellar transport in amphid or phasmid sensory neurons.Paper_evidenceWBPaper00000503
WBPaper00001393
WBPaper00001482
WBPaper00002087
WBPaper00003835
WBPaper00004715
WBPaper00026822
WBPaper00027360
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated23 Feb 2007 00:00:00
Automated_descriptionInvolved in several processes, including non-motile cilium assembly; positive regulation of dauer larval development; and receptor localization to non-motile cilium. Located in ciliary basal body. Human ortholog(s) of this gene implicated in cranioectodermal dysplasia 1. Is an ortholog of human IFT122 (intraflagellar transport 122).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080803Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13556)
Molecular_infoCorresponding_CDSF23B2.4
Corresponding_CDS_historyF23B2.4:wp164
F23B2.4:wp166
Corresponding_transcriptF23B2.4.1
Other_sequence (13)
Associated_featureWBsf652038
Experimental_infoRNAi_resultWBRNAi00098609Inferred_automaticallyRNAi_primary
WBRNAi00013805Inferred_automaticallyRNAi_primary
WBRNAi00098640Inferred_automaticallyRNAi_primary
WBRNAi00045391Inferred_automaticallyRNAi_primary
WBRNAi00098675Inferred_automaticallyRNAi_primary
WBRNAi00098722Inferred_automaticallyRNAi_primary
Expr_patternExpr1015512
Expr1030569
Expr1149314
Expr2010760
Expr2028997
Drives_constructWBCnstr00037204
Construct_productWBCnstr00008557
WBCnstr00017221
WBCnstr00017229
WBCnstr00037204
Regulate_expr_clusterWBPaper00041876:daf-10(m79)_downreglated
WBPaper00041876:daf-10(m79)_upreglated
Microarray_results (20)
Expression_cluster (140)
Interaction (32)
Map_infoMapIVPosition4.05374Error0.000504
Well_ordered
PositivePositive_clone (2)
Mapping_data2_point366
367
429
430
Multi_point1125
3239
Reference (86)
MethodGene