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WormBase Tree Display for Gene: WBGene00000975

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Name Class

WBGene00000975SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion1
NameCGC_namedhs-12Person_evidenceWBPerson651
Sequence_nameK08F4.9
Molecular_nameK08F4.9
K08F4.9.1
CE06157
K08F4.9.2
K08F4.9.3
Other_nameCELE_K08F4.9Accession_evidenceNDBBX284604
Public_namedhs-12
DB_infoDatabaseAceViewgene4K911
WormQTLgeneWBGene00000975
WormFluxgeneWBGene00000975
NDBlocus_tagCELE_K08F4.9
PanthergeneCAEEL|WormBase=WBGene00000975|UniProtKB=G5EG13
familyPTHR43544
NCBIgene177888
RefSeqproteinNM_069449.8
TREEFAMTREEFAM_IDTF314888
TrEMBLUniProtAccG5EG13
UniProt_GCRPUniProtAccG5EG13
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhs
Allele (52)
RNASeq_FPKM (74)
GO_annotation00019377
00019378
OrthologWBGene00026314Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00146581Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00147881Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00065651Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00092799Pristionchus pacificusFrom_analysisOMA
WBGene00100355Pristionchus pacificusFrom_analysisOMA
WBGene00105022Pristionchus pacificusFrom_analysisOMA
WBGene00108270Pristionchus pacificusFrom_analysisOMA
WBGene00109209Pristionchus pacificusFrom_analysisOMA
WBGene00134496Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00226276Brugia malayiFrom_analysisWormBase-Compara
WBGene00230947Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8667Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g11373Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g19881Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g2565Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22102Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23933Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g312Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g313Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g314Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2326Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g2328Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11385Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5302Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6752Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g13084Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_05088.g19345Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14366Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold585.g4793Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00074.g3437Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_24210Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014374Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g11545Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g14823Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g15086Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g15088Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g16500Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20575Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20576Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20577Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20578Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20579Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g227Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2369Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2387Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2724Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2725Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2727Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2728Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g6359Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g6414Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g7174Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g8256Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g9581Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40257820Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11521Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129015Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214181Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239294Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245070Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263407Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264546Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286202Trichuris murisFrom_analysisWormBase-Compara
WBGene00286203Trichuris murisFrom_analysisWormBase-Compara
SGD:S000001554Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
FB:FBgn0030026Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040912-22Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050417-237Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050417-323Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050419-83Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070705-214Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070424-53Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-051113-92Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070112-892Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:1548Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoInspector
HGNC:1549Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoInspector
MGI:88284Mus musculusFrom_analysisEnsEMBL-Compara
OrthoInspector
MGI:1309992Mus musculusFrom_analysisEnsEMBL-Compara
OrthoInspector
MGI:3646098Mus musculusFrom_analysisEnsEMBL-Compara
OrthoInspector
Paralog (22)
Structured_descriptionConcise_descriptiondhs-12 encodes a predicted short-chain dehydrogenase.Curator_confirmedWBPerson1843
Date_last_updated04 Jan 2013 00:00:00
Automated_descriptionPredicted to enable oxidoreductase activity. Predicted to be located in cytoplasm. Is an ortholog of human CBR1 (carbonyl reductase 1) and CBR3 (carbonyl reductase 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK08F4.9
Corresponding_transcriptK08F4.9.1
K08F4.9.2
K08F4.9.3
Other_sequenceCBC04851_1
MIC08702_1
CJC00884_1
CBC08415_1
CRC00438_1
MH00376
MHC00816_1
Associated_featureWBsf228940
Experimental_infoRNAi_resultWBRNAi00069819Inferred_automaticallyRNAi_primary
WBRNAi00050324Inferred_automaticallyRNAi_primary
WBRNAi00023452Inferred_automaticallyRNAi_primary
WBRNAi00110872Inferred_automaticallyRNAi_primary
WBRNAi00053266Inferred_automaticallyRNAi_primary
WBRNAi00081486Inferred_automaticallyRNAi_primary
WBRNAi00027715Inferred_automaticallyRNAi_primary
WBRNAi00034154Inferred_automaticallyRNAi_primary
WBRNAi00018674Inferred_automaticallyRNAi_primary
WBRNAi00016834Inferred_automaticallyRNAi_primary
WBRNAi00018675Inferred_automaticallyRNAi_primary
WBRNAi00046117Inferred_automaticallyRNAi_primary
WBRNAi00069796Inferred_automaticallyRNAi_primary
WBRNAi00016832Inferred_automaticallyRNAi_primary
WBRNAi00016833Inferred_automaticallyRNAi_primary
WBRNAi00016744Inferred_automaticallyRNAi_primary
WBRNAi00050326Inferred_automaticallyRNAi_primary
WBRNAi00010148Inferred_automaticallyRNAi_primary
WBRNAi00115456Inferred_automaticallyRNAi_primary
WBRNAi00014208Inferred_automaticallyRNAi_primary
WBRNAi00081536Inferred_automaticallyRNAi_primary
WBRNAi00090639Inferred_automaticallyRNAi_primary
WBRNAi00081511Inferred_automaticallyRNAi_primary
WBRNAi00087561Inferred_automaticallyRNAi_primary
WBRNAi00115523Inferred_automaticallyRNAi_primary
WBRNAi00023029Inferred_automaticallyRNAi_primary
WBRNAi00053267Inferred_automaticallyRNAi_primary
Expr_patternExpr1018106
Expr1030608
Expr1154028
Expr2010895
Expr2029134
Drives_constructWBCnstr00037166
Construct_productWBCnstr00037166
Microarray_results (31)
Expression_cluster (197)
Interaction (103)
Map_infoMapIVPosition4.54171Error0.001128
PositivePositive_cloneK08F4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026640
WBPaper00041771
WBPaper00042257
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene